Training materials
Scientific topics: Transcriptomics
and Authors: Anthony Bretaudeau or Bérénice Batut or David Wishart or Hans-Rudolf Hotz or Jessica Kirkpatrick krkptrc2@illinois.edu or Wandrille Duchemin or blankclemens
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slides
Introduction to Transcriptomics
• beginnerTranscriptomics -
hands-on tutorial
RNA-Seq analysis with AskOmics Interactive Tool
• beginnerTranscriptomics -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'Pre-processing of 10X Single-Cell RNA Datasets' tutorial
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hands-on tutorial
CLIP-Seq data analysis from pre-processing to motif detection
• beginnerTranscriptomics -
hands-on tutorial
Pre-processing of Single-Cell RNA Data
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Hands-on for 'Clustering 3K PBMCs with Scanpy' tutorial
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hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnertranscriptomics bulk rna-seq collections drosophila QC cyoa -
slides
Integrate and query local datasets and distant RDF data with AskOmics using Semantic Web technologies
• beginnerTranscriptomics -
slides
Introduction to 'Transcriptomics'