Training materials
Authors: Anika Erxleben or David Wishart or Dayane Araujo or Eija Korpelainen @eija, ekorpelainen@gmail.com or Gary Bader or Lucille Delisle or Praveen Kumar or Timothy J. Griffin
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hands-on tutorial
Genome Annotation
• beginnerGenome Annotation prokaryote work-in-progress -
hands-on tutorial
Metatranscriptomics analysis using microbiome RNA-seq data
• beginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
hands-on tutorial
Metatranscriptomics analysis using microbiome RNA-seq data (short)
• beginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
slides
Introduction to Transcriptomics
• beginnerTranscriptomics -
Video
ELIXIR-CONVERGE - The why of research data management
• beginnerData management FAIR data Data submission, annotation, and curation Data security Data integration and warehousing Data Life Cycle Data Steward Data Data access management Data management plan Data managment plan Data handling ELIXIR-CONVERGE -
Galaxy Introduction for Life Scientists
• beginnerbasic research experimental biology interoperability next generation sequencing reproducibility training michael stadler group -
hands-on tutorial
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerDatabase management Informatics Data management Galaxy Server administration ansible deploying git-gat -
hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
ATAC-Seq data analysis
• beginnerEpigenomics Epigenetics -
hands-on tutorial
Formation of the Super-Structures on the Inactive X
• beginnerEpigenomics ChIP-seq Epigenetics