Training materials
Authors: Anika Erxleben or Anthony Bretaudeau
and Contributors: Anton Nekrutenko or Björn Grüning or Carolyn Hogg or Dr. Scooter Morris or Erasmus+ Programme or Mallory Freeberg
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hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (eukaryotes)' tutorial
•• intermediategenome-annotation eukaryote cyoa -
hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (prokaryotes)' tutorial
•• intermediategenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)' tutorial
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hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnertranscriptomics bulk rna-seq collections drosophila QC cyoa -
slides
Slides for 'Refining Genome Annotations with Apollo' tutorial
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slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly
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