Training materials
Licence: Creative Commons Attribution 4.0 International
and Authors: Allegra Via or Celia van Gelder or Dayane Araujo or Deshpande, Nandan (orcid: 0000-0002-0324-8728) or Kathi Zarnack or Nicola Soranzo
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Training materials
ELITMa Module "Data Management Strategy" (Finland 28-29 June 2023)
• beginnerResearch Data Management RDM Strategy Training -
WEBINAR: Getting started with RNAseq: Transforming raw reads into biological insights
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Video
ELIXIR-CONVERGE - The why of research data management
• beginnerData management FAIR data Data submission, annotation, and curation Data security Data integration and warehousing Data Life Cycle Data Steward Data Data access management Data management plan Data managment plan Data handling ELIXIR-CONVERGE -
WORKSHOP: RNA-Seq: reads to differential genes and pathways
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WEBINAR: Portable, reproducible and scalable bioinformatics workflows using Nextflow and Pawsey Nimbus Cloud
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WORKSHOP: Working with genomics sequences and features in R with Bioconductor
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hands-on tutorial
Hands-on for 'Calling variants in diploid systems' tutorial
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hands-on tutorial
Hands-on for 'Scripting Galaxy using the API and BioBlend' tutorial
• beginnerdev jupyter-notebook -
hands-on tutorial
Hands-on for 'Single-cell quality control with scater' tutorial
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hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnertranscriptomics bulk rna-seq collections drosophila QC cyoa