Training materials
Scientific topics: Genomics
and Include archived: true
and Authors: Allegra Via or Anna Syme or Eija Korpelainen or Emma Rand or Friederike Ehrhart or Jared Simpson or Julie Sullivan or Maria Victoria . or Mark Fernandes or Michael Love or Sarah Morgan or nekrut or pajanne
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course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
course materials, online course, Training materials
Cloud-SPAN Prenomics
• beginnerBioinformatics Software engineering Genomics Query and retrieval Data handling Cloud computing Shell Command line Amazon Web Services genomics HPC Data analysis bioinformatics -
hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
course materials, Training materials, Slides, Video
RNA-seq data analysis using Chipster
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Tutorial
How to install and load the Identifier Mapping Service with data needed for gene-to-variant and variant-to-gene