Training materials
Difficulty level: Intermediate
and Authors: Alexander Botzki or Alexander Botzki | https://orcid.org/0000-0001-... or Alexandre Cormier or Dominik Frantisek Bucik or Jan Slifka or Javi Conejero or Maria Christina Maniou
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Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
hands-on tutorial
AlphaFold and friends on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction AlphaFold Database (13181) -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
Plotting in Python
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Advanced Python
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
Tutorial
Tutorial on developing Building Blocks
•• intermediateBioinformatics Workflows Personalised medicine HPC building blocks -
Documentation, Presentation
ELIXIR AAI Engagement Meetings Materials
•• intermediateComputer science AAI IAM Authentication authorisation -
Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow -
Webinar, Presentation, Documentation
Integrating to ELIXIR AAI -- instructions for developers
•• intermediateComputer science AAI IAM Authentication authorisation
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