Training materials
Difficulty level: Intermediate
and Authors: Alexander Botzki | https://orcid.org/0000-0001... or Bartosz Bartmanski or Daniel Blankenberg or Jan Slifka or Martin Čech or Subina Mehta
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Slideshow, Training materials
Prediction of protein structures and complexes with AlphaFold on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction Structure visualisation Multiple sequence alignment AlphaFold Database (13181) -
hands-on tutorial
Hands-on for 'metaQuantome 3: Taxonomy' tutorial
•• intermediateproteomics microbiome -
hands-on tutorial
Hands-on for 'Proteogenomics 1: Database Creation' tutorial
•• intermediateproteomics proteogenomics -
hands-on tutorial
Hands-on for 'Proteogenomics 2: Database Search' tutorial
•• intermediateproteomics proteogenomics -
hands-on tutorial
Peptide Library Data Analysis
•• intermediateProteomics -
hands-on tutorial
Hands-on for 'metaQuantome 2: Function' tutorial
•• intermediateproteomics microbiome -
hands-on tutorial
Hands-on for 'metaQuantome 1: Data creation' tutorial
•• intermediateproteomics microbiome -
hands-on tutorial
Hands-on for 'Machine Learning Modeling of Anticancer Peptides' tutorial
•• intermediateproteomics ML cancer -
hands-on tutorial
Hands-on for 'Proteogenomics 3: Novel peptide analysis' tutorial
•• intermediateproteomics proteogenomics -
Tutorial
Tutorial on CARNIVAL
•• intermediateMolecular interactions, pathways and networks Gene expression Omics RNA-Seq Network analysis RNA-Seq analysis HPC Signaling RNAseq, transcriptomics
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