hands-on tutorial
Nextflow for reproducible and automated data analysis
You will learn how to use Nextflow for building scalable and reproducible bioinformatics pipelines and running them on a personal computer, cluster and cloud. Starting from the basic concepts we will build our own simple pipeline and add new features with every step, all in the new DSL2 language.
Licence: Creative Commons Attribution 4.0 International
Keywords: Computing environment, Nextflow, Reproducible data analysis, Workflow
Target audience: Life scientists with programming skills
Resource type: hands-on tutorial
Version: 1.0
Learning objectives:
- Describe Nextflow's basic concepts: channels, processes, modules, workflows, etc.
- Write and modify config files for storing parameters related to computing hardware as well as pipeline dependent parameters.
- Write and run a modular Nextflow pipeline.
Date created: 2026-03-15
Contributors: Tuur Muyldermans, VIB
Scientific topics: Workflow, Software engineering
Activity log

Belgium