Content Providers
Keywords: Cloud computing or Epigenomics or MOOC or Metabolomics or Multiple sequence analysis or Protein secondary structure or RNA or infrastructure or life-sciences or metabolome or omics or phenome or product safety
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IFB French Institute of Bioinformatics
The French Institute of Bioinformatics (CNRS IFB) is a national service infrastructure in bioinformatics. IFB’s principal mission is to provide basic services and resources in bioinformatics for scientists and engineers working in the life sciences. IFB is the French node of the European research...
144 training materials15 events (457 past events)IFB French Institute of Bioinformatics http://www.france-bioinformatique.fr https://tess.elixir-europe.org/content_providers/ifb-french-institute-of-bioinformatics The French Institute of Bioinformatics (CNRS IFB) is a national service infrastructure in bioinformatics. IFB’s principal mission is to provide basic services and resources in bioinformatics for scientists and engineers working in the life sciences. IFB is the French node of the European research infrastructure, ELIXIR. /system/content_providers/images/000/000/049/original/logo-ifb-couleur.svg?1663599376 -
Birmingham Metabolomics Training Centre
Providing training to empower the next generation of metabolomics researchers.
The Birmingham Metabolomics Training Centre provides training to the metabolomics community in both analytical and computational methods. The training centre partners with both the Phenome Centre Birmingham and the...
0 events (26 past events)Birmingham Metabolomics Training Centre https://www.birmingham.ac.uk/facilities/metabolomics-training-centre/course-list.aspx https://tess.elixir-europe.org/content_providers/birmingham-metabolomics-training-centre Providing training to empower the next generation of metabolomics researchers. The Birmingham Metabolomics Training Centre provides training to the metabolomics community in both analytical and computational methods. The training centre partners with both the Phenome Centre Birmingham and the NERC Biomolecular Analysis Facility to provide vocational training courses in clinical and environmental metabolomics. We offer a combination of both face-to-face and online courses. The Birmingham Metabolomics Training Centre is directed by Dr Warwick Dunn, Professor Mark Viant, Dr Ralf Weber and Dr Catherine Winder. /system/content_providers/images/000/000/084/original/12106_BMTC_lock-up_AW-01.jpg?1508159124 -
NanoCommons
NanoCommons will deliver a sustainable and openly accessible nanoinformatics framework (knowledgebase and integrated computational tools, supported by expert advice, data interpretation and training), for assessment of the risks of NMs, their products and their formulations. NanoCommons combines...
9 training materials0 events (21 past events)NanoCommons https://www.nanocommons.eu/ https://86.50.28.174/content_providers/nanocommons NanoCommons will deliver a sustainable and openly accessible nanoinformatics framework (knowledgebase and integrated computational tools, supported by expert advice, data interpretation and training), for assessment of the risks of NMs, their products and their formulations. NanoCommons combines Joint Research Activities to implement the nanoinformatics Knowledge Commons, Networking Activities to facilitate engagement with the research community, industry and regulators, and provision of funded Access to the nanoinformatics tools via funded calls for Transnational Access. /system/content_providers/images/000/000/099/original/NanoCommons-Logo-Sphere-Trans-White-circle-512px.png?1650899421 -
ELIXIR Slovenia
Slovenian national ELIXIR node
5 training materials0 events (19 past events)ELIXIR Slovenia https://elixir.mf.uni-lj.si https://tess.elixir-europe.org/content_providers/elixir-slovenia Slovenian national ELIXIR node /system/content_providers/images/000/000/103/original/ELIXIR_SLOVENIA_white_background.png?1544083070 -
Department of Bioinformatics - BiGCaT, Maastricht University
The department of Bioinformatics-BiGCaT is part of NUTRIM the school of Nutrition and Translational Research in Metabolism at Maastricht University, the Netherlands. It was founded in 2001 by Prof. dr. Chris Evelo aiming at employing bioinformatics approaches in systems biology to integrate...
8 training materials0 events (1 past event)Department of Bioinformatics - BiGCaT, Maastricht University https://www.bigcat.unimaas.nl/ https://tess.elixir-europe.org/content_providers/department-of-bioinformatics-bigcat-maastricht-university The department of Bioinformatics-BiGCaT is part of NUTRIM the school of Nutrition and Translational Research in Metabolism at Maastricht University, the Netherlands. It was founded in 2001 by Prof. dr. Chris Evelo aiming at employing bioinformatics approaches in systems biology to integrate experimental data and data with current knowledge. Integrative Systems Biology is being developed and applied in various research fields. The department has four core research areas; 1) Metabolic diseases, 2) Micronutrients, 3) Toxicity and risk Assessment and 4) Rare diseases. Within these areas different types of data, like transcriptomics, proteomics, metabolomics and (epi)genomics data, are collected , integrated and combined with existing knowledge /system/content_providers/images/000/000/093/original/logo_05_72dpi.gif?1528366508 -
Centre for Genomic Regulation (CRG)
The CRG is an international biomedical research institute of excellence whose mission is to discover and advance knowledge for the benefit of society, public health and economic prosperity.
4 training materials0 events (2 past events)Centre for Genomic Regulation (CRG) https://www.crg.eu https://tess.elixir-europe.org/content_providers/centre-for-genomic-regulation-crg The CRG is an international biomedical research institute of excellence whose mission is to discover and advance knowledge for the benefit of society, public health and economic prosperity. /system/content_providers/images/000/000/647/original/LOGOs-CRG-ENG_2014.jpg?1659436926 -
Jalview
Jalview (www.jalview.org) is free-to-use sequence alignment and analysis visualisation software that links genomic variants, protein alignments and 3D structure.
Protein, RNA and DNA data can be directly accessed from public databases (e.g. Pfam, Rfam, PDB, UniProt and ENA etc.). Jalview has...
0 events (2 past events)Jalview http://www.jalview.org/ https://tess.elixir-europe.org/content_providers/jalview Jalview (www.jalview.org) is free-to-use sequence alignment and analysis visualisation software that links genomic variants, protein alignments and 3D structure. Protein, RNA and DNA data can be directly accessed from public databases (e.g. Pfam, Rfam, PDB, UniProt and ENA etc.). Jalview has editing and annotation functionality within a fully integrated, multiple window interface. The sequence alignment programs Clustal Omega, Muscle, MAFFT, ProbCons, T-COFFEE, ClustalW, MSA Prob and GLProb can be run directly from within Jalview. Jalview integrates protein secondary structure prediction (JPred), generate trees, assesses consensus and conservation across sequence families. Journal quality figures can be generated from the results. The Jalview Desktop will run on Mac, MS Windows, Linux and any other platform that supports Java. It has been developed in Geoff Barton's group (www.compbio.dundee.ac.uk) in the School of Life Sciences (www.lifesci.dundee.ac.uk) at the University of Dundee with funding from the BBSRC and the Wellcome Trust. /system/content_providers/images/000/000/091/original/logo-boxg.png?1524735946 -
Open Science MOOC
Open Science MOOC is a mission-driven project to help make ‘Open’ the default setting for all global research. We want to help create a welcoming and supporting community, with good tools, teachers, and role-models, and built upon a solid values-based foundation of freedom and equitable access to...
1 training materialOpen Science MOOC https://opensciencemooc.eu/ https://86.50.228.192/content_providers/open-science-mooc Open Science MOOC is a mission-driven project to help make ‘Open’ the default setting for all global research. We want to help create a welcoming and supporting community, with good tools, teachers, and role-models, and built upon a solid values-based foundation of freedom and equitable access to research. /system/content_providers/images/000/000/101/original/31343113?1536821365 -
Cloud-SPAN
Cloud-SPAN deploys high quality learning resources that will train researchers to effectively generate and analyse a range of 'omics data using Cloud computing resources. The following activities and learning materials related to the project:
- Prenomics
- Genomics
- Create your own AWS...1 training materialCloud-SPAN https://cloud-span.york.ac.uk/ https://tess.elixir-europe.org/content_providers/cloud-span Cloud-SPAN deploys high quality learning resources that will train researchers to effectively generate and analyse a range of 'omics data using Cloud computing resources. The following activities and learning materials related to the project: - Prenomics - Genomics - Create your own AWS instance - Metagenomics - Statistically useful experimental design - Automation & pipelines (WIP) - Core R (WIP) /system/content_providers/images/000/000/658/original/cloud-span-logo-square.png?1666085149 -
University of Ljubljana, Faculty of Medicine
Faculty of Medicine is part of University of Ljubljana, the oldest and largest institution of higher education in Slovenia. The faculty carries out research and provides training in the fields of medicine, dental medicine and life sciences.
University of Ljubljana, Faculty of Medicine https://www.mf.uni-lj.si/en https://86.50.228.192/content_providers/university-of-ljubljana-faculty-of-medicine Faculty of Medicine is part of University of Ljubljana, the oldest and largest institution of higher education in Slovenia. The faculty carries out research and provides training in the fields of medicine, dental medicine and life sciences. /system/content_providers/images/000/000/104/original/mf-znal.png?1539848321
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