Content Providers
Keywords: Cancer or Data Analysis or Deployment or MSA or RNA or Standards or Toxicology or eLearning or infrastructure or interoperability or metabolome or micronutrition or modelling
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IFB French Institute of Bioinformatics
The French Institute of Bioinformatics (CNRS IFB) is a national service infrastructure in bioinformatics. IFB’s principal mission is to provide basic services and resources in bioinformatics for scientists and engineers working in the life sciences. IFB is the French node of the European research...
144 training materials15 events (457 past events)IFB French Institute of Bioinformatics http://www.france-bioinformatique.fr https://tess.elixir-europe.org/content_providers/ifb-french-institute-of-bioinformatics The French Institute of Bioinformatics (CNRS IFB) is a national service infrastructure in bioinformatics. IFB’s principal mission is to provide basic services and resources in bioinformatics for scientists and engineers working in the life sciences. IFB is the French node of the European research infrastructure, ELIXIR. /system/content_providers/images/000/000/049/original/logo-ifb-couleur.svg?1663599376 -
Birmingham Metabolomics Training Centre
Providing training to empower the next generation of metabolomics researchers.
The Birmingham Metabolomics Training Centre provides training to the metabolomics community in both analytical and computational methods. The training centre partners with both the Phenome Centre Birmingham and the...
0 events (26 past events)Birmingham Metabolomics Training Centre https://www.birmingham.ac.uk/facilities/metabolomics-training-centre/course-list.aspx https://tess.elixir-europe.org/content_providers/birmingham-metabolomics-training-centre Providing training to empower the next generation of metabolomics researchers. The Birmingham Metabolomics Training Centre provides training to the metabolomics community in both analytical and computational methods. The training centre partners with both the Phenome Centre Birmingham and the NERC Biomolecular Analysis Facility to provide vocational training courses in clinical and environmental metabolomics. We offer a combination of both face-to-face and online courses. The Birmingham Metabolomics Training Centre is directed by Dr Warwick Dunn, Professor Mark Viant, Dr Ralf Weber and Dr Catherine Winder. /system/content_providers/images/000/000/084/original/12106_BMTC_lock-up_AW-01.jpg?1508159124 -
ELIXIR Slovenia
Slovenian national ELIXIR node
5 training materials0 events (19 past events)ELIXIR Slovenia https://elixir.mf.uni-lj.si https://tess.elixir-europe.org/content_providers/elixir-slovenia Slovenian national ELIXIR node /system/content_providers/images/000/000/103/original/ELIXIR_SLOVENIA_white_background.png?1544083070 -
BioExcel
BioExcel is the leading European Centre of Excellence for Computational Biomolecular Research. BioExcel develops some of the most popular open-source applications for modelling and simulations of biomolecular systems along with user-friendly workflows and container solutions. The software stack...
5 events (12 past events)BioExcel http://bioexcel.eu/ https://tess.elixir-europe.org/content_providers/bioexcel BioExcel is the leading European Centre of Excellence for Computational Biomolecular Research. BioExcel develops some of the most popular open-source applications for modelling and simulations of biomolecular systems along with user-friendly workflows and container solutions. The software stack comes with great performance and scalability capabilities for extreme-scale utilization of the world's largest high-performance computing (HPC) and high-throughput computing (HTC) compute resource. /system/content_providers/images/000/000/053/original/BioExcel_logo_payoff.png?1470306206 -
PerMedCoE
PerMedCoE is the HPC/Exascale Centre of Excellence for Personalised Medicine in Europe.
12 training materialsPerMedCoE https://permedcoe.eu https://tess.elixir-europe.org/content_providers/permedcoe PerMedCoE is the HPC/Exascale Centre of Excellence for Personalised Medicine in Europe. /system/content_providers/images/000/000/637/original/LOGO_PerMedCoE.jpg?1636473064 -
OpenRiskNet
The main objective of OpenRiskNet is to develop an open e-Infrastructure providing resources and services to a variety of communities requiring risk assessment, including chemicals, cosmetic ingredients, therapeutic agents and nanomaterials.
OpenRiskNet is
* a virtual research environment for...0 events (10 past events)OpenRiskNet https://openrisknet.org/ https://tess.elixir-europe.org/content_providers/openrisknet The main objective of OpenRiskNet is to develop an open e-Infrastructure providing resources and services to a variety of communities requiring risk assessment, including chemicals, cosmetic ingredients, therapeutic agents and nanomaterials. OpenRiskNet is * a virtual research environment for predictive toxicology and chemical and nanomaterial risk assessment, * harmonising access to data and facilitating interoperability of software, * easily deployable to single computers, public and in-house cloud solutions, * addressing the needs of industry and academic researchers, risk assessors, regulators and informed public. OpenRiskNet (Grant Agreement 731075) is a 3-years project funded by the European Commission within the Horizon2020 Programme /system/content_providers/images/000/000/097/original/ORN-Web_Logo3.png?1533933310 -
Department of Bioinformatics - BiGCaT, Maastricht University
The department of Bioinformatics-BiGCaT is part of NUTRIM the school of Nutrition and Translational Research in Metabolism at Maastricht University, the Netherlands. It was founded in 2001 by Prof. dr. Chris Evelo aiming at employing bioinformatics approaches in systems biology to integrate...
8 training materials0 events (1 past event)Department of Bioinformatics - BiGCaT, Maastricht University https://www.bigcat.unimaas.nl/ https://tess.elixir-europe.org/content_providers/department-of-bioinformatics-bigcat-maastricht-university The department of Bioinformatics-BiGCaT is part of NUTRIM the school of Nutrition and Translational Research in Metabolism at Maastricht University, the Netherlands. It was founded in 2001 by Prof. dr. Chris Evelo aiming at employing bioinformatics approaches in systems biology to integrate experimental data and data with current knowledge. Integrative Systems Biology is being developed and applied in various research fields. The department has four core research areas; 1) Metabolic diseases, 2) Micronutrients, 3) Toxicity and risk Assessment and 4) Rare diseases. Within these areas different types of data, like transcriptomics, proteomics, metabolomics and (epi)genomics data, are collected , integrated and combined with existing knowledge /system/content_providers/images/000/000/093/original/logo_05_72dpi.gif?1528366508 -
ELIXIR-SI eLearning Platform (EeLP)
ELIXIR-SI eLearning Platform (EeLP) is a learning management system (LMS) continuously administered and maintained by ELIXIR Slovenia.
EeLP enables all-in-one-place access to materials, tools and services for any course, tutorial or webinar that is hosted on the platform.
6 training materials0 events (8 past events)ELIXIR-SI eLearning Platform (EeLP) https://elixir.mf.uni-lj.si/ https://tess.elixir-europe.org/content_providers/elixir-si-elearning-platfrom-eelp ELIXIR-SI eLearning Platform (EeLP) is a learning management system (LMS) continuously administered and maintained by ELIXIR Slovenia. EeLP enables all-in-one-place access to materials, tools and services for any course, tutorial or webinar that is hosted on the platform. /system/content_providers/images/000/000/108/original/eelp-logo-with-slogan.jpg?1544007788 -
VHP4Safety
Material from the Dutch VHP4Safety project.
4 training materialsVHP4Safety https://vhp4safety.nl/ https://tess.elixir-europe.org/content_providers/vhp4safety Material from the Dutch VHP4Safety project. /system/content_providers/images/000/000/688/original/6XmjhQ2C_400x400.jpg?1696237918 -
Jalview
Jalview (www.jalview.org) is free-to-use sequence alignment and analysis visualisation software that links genomic variants, protein alignments and 3D structure.
Protein, RNA and DNA data can be directly accessed from public databases (e.g. Pfam, Rfam, PDB, UniProt and ENA etc.). Jalview has...
0 events (2 past events)Jalview http://www.jalview.org/ https://tess.elixir-europe.org/content_providers/jalview Jalview (www.jalview.org) is free-to-use sequence alignment and analysis visualisation software that links genomic variants, protein alignments and 3D structure. Protein, RNA and DNA data can be directly accessed from public databases (e.g. Pfam, Rfam, PDB, UniProt and ENA etc.). Jalview has editing and annotation functionality within a fully integrated, multiple window interface. The sequence alignment programs Clustal Omega, Muscle, MAFFT, ProbCons, T-COFFEE, ClustalW, MSA Prob and GLProb can be run directly from within Jalview. Jalview integrates protein secondary structure prediction (JPred), generate trees, assesses consensus and conservation across sequence families. Journal quality figures can be generated from the results. The Jalview Desktop will run on Mac, MS Windows, Linux and any other platform that supports Java. It has been developed in Geoff Barton's group (www.compbio.dundee.ac.uk) in the School of Life Sciences (www.lifesci.dundee.ac.uk) at the University of Dundee with funding from the BBSRC and the Wellcome Trust. /system/content_providers/images/000/000/091/original/logo-boxg.png?1524735946
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