Content Providers
Keywords: Bioinformatics tools or DNA-seq or Data management or EeLP or Git or Life Sciences or RNA or birmingham or immunology or infrastructure or metabolic profiling or metabolome
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Glittr.org
Glittr (https://glittr.org) is a web application that helps you find and compare bioinformatics training materials on GitHub and GitLab.
621 training materialsGlittr.org https://glittr.org https://tess.elixir-europe.org/content_providers/glittr-org Glittr (https://glittr.org) is a web application that helps you find and compare bioinformatics training materials on GitHub and GitLab. /system/content_providers/images/000/000/692/original/logo-with-domain.png?1698843802 -
GTN
The GTN is a global community of teachers, trainers, developers, administrators, and learners based around the Galaxy Platform!
For Learners
Our community provides over 370 high quality, peer-reviewed training materials...698 training materials26 events (12 past events)GTN https://training.galaxyproject.org/ https://tess.elixir-europe.org/content_providers/galaxy-training The GTN is a global community of teachers, trainers, developers, administrators, and learners based around the [Galaxy Platform](https://galaxyproject.org)! **For Learners** Our community provides over [370 high quality](https://training.galaxyproject.org/), peer-reviewed training materials from a global community of [330 instructors](https://training.galaxyproject.org/training-material/hall-of-fame/), with a focus on reproducibility and [FAIRness](https://training.galaxyproject.org/training-material/faqs/gtn/fair_training.html). **Not Just Galaxy** We've expanded our content to include data science, software development, and even alternative <abbr title="scientific workflow management systems">SciWMSs</abbr> like snakemake! **For Teachers** All of our materials are [FAIR](https://training.galaxyproject.org/training-material/faqs/gtn/fair_training.html), and we put a lot of effort into the platform's [accessibility for all audiences.](https://training.galaxyproject.org/accessibility.html). If you're interested in [contributing your own materials](https://training.galaxyproject.org/training-material/topics/contributing/) we'd love to help you share them with the world! Most of our materials are licensed CC-BY-SA so you're welcome to use these materials for your own course and classes! If you want to use a specific version of a material you may be interested in accessing them via [our archive](https://training.galaxyproject.org/archive/). **For Administrators** If you're a budding Galaxy Administrator, or an experienced one looking to catch up, the GTN is the source for all of those materials. We also work to make it easy for you as an admin to support tutorials on your infrastructure, you'll find a list of tools and their installation instructions at the bottom of every tutorial. /system/content_providers/images/000/000/078/original/GTN-400px.png?1718821926 -
IFB French Institute of Bioinformatics
The French Institute of Bioinformatics (CNRS IFB) is a national service infrastructure in bioinformatics. IFB’s principal mission is to provide basic services and resources in bioinformatics for scientists and engineers working in the life sciences. IFB is the French node of the European research...
144 training materials15 events (457 past events)IFB French Institute of Bioinformatics http://www.france-bioinformatique.fr https://tess.elixir-europe.org/content_providers/ifb-french-institute-of-bioinformatics The French Institute of Bioinformatics (CNRS IFB) is a national service infrastructure in bioinformatics. IFB’s principal mission is to provide basic services and resources in bioinformatics for scientists and engineers working in the life sciences. IFB is the French node of the European research infrastructure, ELIXIR. /system/content_providers/images/000/000/049/original/logo-ifb-couleur.svg?1663599376 -
Birmingham Metabolomics Training Centre
Providing training to empower the next generation of metabolomics researchers.
The Birmingham Metabolomics Training Centre provides training to the metabolomics community in both analytical and computational methods. The training centre partners with both the Phenome Centre Birmingham and the...
0 events (26 past events)Birmingham Metabolomics Training Centre https://www.birmingham.ac.uk/facilities/metabolomics-training-centre/course-list.aspx https://tess.elixir-europe.org/content_providers/birmingham-metabolomics-training-centre Providing training to empower the next generation of metabolomics researchers. The Birmingham Metabolomics Training Centre provides training to the metabolomics community in both analytical and computational methods. The training centre partners with both the Phenome Centre Birmingham and the NERC Biomolecular Analysis Facility to provide vocational training courses in clinical and environmental metabolomics. We offer a combination of both face-to-face and online courses. The Birmingham Metabolomics Training Centre is directed by Dr Warwick Dunn, Professor Mark Viant, Dr Ralf Weber and Dr Catherine Winder. /system/content_providers/images/000/000/084/original/12106_BMTC_lock-up_AW-01.jpg?1508159124 -
VIB Conferences
VIB is a life sciences research institute in Flanders, Belgium. More than 1470 scientists from over 66 countries perform basic research into the molecular foundations of life. The institute offers a program of international VIB conferences in various VIB research fields. From day one VIB has...
1 training material0 events (19 past events)VIB Conferences http://www.vibconferences.be/ https://tess.elixir-europe.org/content_providers/vib-conferences VIB is a life sciences research institute in Flanders, Belgium. More than 1470 scientists from over 66 countries perform basic research into the molecular foundations of life. The institute offers a program of international VIB conferences in various VIB research fields. From day one VIB has supported and sponsored scientific conferences to help VIB scientists network with their colleagues. In 2014 the VIB Conference Series was launched to further expand these activities and support them with a dedicated professional team. The aims of the conference series are: to showcase cutting edge research and exciting technological solutions presented by leading scientist in the life sciences fields to offer junior researchers the opportunity to present their work during poster sessions and learn from the world’s experts during the Meet the Expert sessions to establish opportunities for collaborations between scientists during an accompanying social program including lunches, conference dinners and receptions /system/content_providers/images/000/000/054/original/vib_conferences_series_rgb_pos.png?1538645378 -
ELIXIR Slovenia
Slovenian national ELIXIR node
5 training materials0 events (19 past events)ELIXIR Slovenia https://elixir.mf.uni-lj.si https://tess.elixir-europe.org/content_providers/elixir-slovenia Slovenian national ELIXIR node /system/content_providers/images/000/000/103/original/ELIXIR_SLOVENIA_white_background.png?1544083070 -
ELIXIR-SI eLearning Platform (EeLP)
ELIXIR-SI eLearning Platform (EeLP) is a learning management system (LMS) continuously administered and maintained by ELIXIR Slovenia.
EeLP enables all-in-one-place access to materials, tools and services for any course, tutorial or webinar that is hosted on the platform.
6 training materials0 events (8 past events)ELIXIR-SI eLearning Platform (EeLP) https://elixir.mf.uni-lj.si/ https://tess.elixir-europe.org/content_providers/elixir-si-elearning-platfrom-eelp ELIXIR-SI eLearning Platform (EeLP) is a learning management system (LMS) continuously administered and maintained by ELIXIR Slovenia. EeLP enables all-in-one-place access to materials, tools and services for any course, tutorial or webinar that is hosted on the platform. /system/content_providers/images/000/000/108/original/eelp-logo-with-slogan.jpg?1544007788 -
University of Leicester Bioinformatics and Biostatistics Analysis Support Hub (BBASH)
The ongoing development of next generation sequencing (NGS) technologies has meant that vast amounts of sequencing data is being produced, with researchers increasingly wanting the capability and knowledge to analyse their own data. Over the past 3 years BBASH has developed a number of 1, 2 and...
0 events (2 past events)University of Leicester Bioinformatics and Biostatistics Analysis Support Hub (BBASH) https://www2.le.ac.uk/colleges/medbiopsych/facilities-and-services/cbs/bbash https://tess.elixir-europe.org/content_providers/university-of-leicester-bioinformatics-and-biostatistics-analysis-support-hub-bbash The ongoing development of next generation sequencing (NGS) technologies has meant that vast amounts of sequencing data is being produced, with researchers increasingly wanting the capability and knowledge to analyse their own data. Over the past 3 years BBASH has developed a number of 1, 2 and 3 day hands-on, NGS analysis workshops designed specificially to meet the needs of laboratory based researchers with little or no experience of NGS data analysis and command line tools. The workshops are held at the University of Leicester's state of the art College Court Conference Centre and consist of introductory presentations followed by practical sessions where delegates will gain hands-on experience of analysing and interpreting real data. The BBASH trainers are University of Leicester bioinformaticians or researchers with many years experience in bioinformatics and bioinformatics training, having delivered many workshops across the UK and Europe. /system/content_providers/images/000/000/086/original/BBASHlogo.png?1509536575 -
Jalview
Jalview (www.jalview.org) is free-to-use sequence alignment and analysis visualisation software that links genomic variants, protein alignments and 3D structure.
Protein, RNA and DNA data can be directly accessed from public databases (e.g. Pfam, Rfam, PDB, UniProt and ENA etc.). Jalview has...
0 events (2 past events)Jalview http://www.jalview.org/ https://tess.elixir-europe.org/content_providers/jalview Jalview (www.jalview.org) is free-to-use sequence alignment and analysis visualisation software that links genomic variants, protein alignments and 3D structure. Protein, RNA and DNA data can be directly accessed from public databases (e.g. Pfam, Rfam, PDB, UniProt and ENA etc.). Jalview has editing and annotation functionality within a fully integrated, multiple window interface. The sequence alignment programs Clustal Omega, Muscle, MAFFT, ProbCons, T-COFFEE, ClustalW, MSA Prob and GLProb can be run directly from within Jalview. Jalview integrates protein secondary structure prediction (JPred), generate trees, assesses consensus and conservation across sequence families. Journal quality figures can be generated from the results. The Jalview Desktop will run on Mac, MS Windows, Linux and any other platform that supports Java. It has been developed in Geoff Barton's group (www.compbio.dundee.ac.uk) in the School of Life Sciences (www.lifesci.dundee.ac.uk) at the University of Dundee with funding from the BBSRC and the Wellcome Trust. /system/content_providers/images/000/000/091/original/logo-boxg.png?1524735946 -
Biomedical Sciences Research Center "Alexander Fleming"
The Biomedical Sciences Research Center "Alexander Fleming" is a non-profit research organisation based in Vari, Athens, Greece.
Since the beginning of its operations in 1998, the Center develops basic as well as translational and applied research programs at the cutting edge of modern...
1 training materialBiomedical Sciences Research Center "Alexander Fleming" https://www.fleming.gr/ https://tess.elixir-europe.org/content_providers/biomedical-sciences-research-center-alexander-fleming The Biomedical Sciences Research Center "Alexander Fleming" is a non-profit research organisation based in Vari, Athens, Greece. Since the beginning of its operations in 1998, the Center develops basic as well as translational and applied research programs at the cutting edge of modern biomedical sciences. Currently, the Center hosts 14 research groups distributed in 4 Institutes (Immunology, Molecular Oncology, Molecular Biology and Genetics, Cellular & Developmental Biology). Over the short period since its establishment, BSRC "Alexander Fleming" has gained extensive visibility in the European science arena. Fleming researchers have established transgenic animal models for rheumatoid arthritis, inflammatory bowel disease and multiple sclerosis and these models have served as a basis for multiple collaborations with the international biopharmaceutical industry in the evaluation of novel therapeutic compounds, or as tools for collaborative R&D. The Center is equipped with state-of-the-art Core Units which include: an Expression Profiling Facility, a Flow Cytometry Facility, a Protein Chemistry Lab, a Transgenics and gene targeting Unit, and a BioIT Unit, all of which serve internal collaborations, as well as external partners in academia and industry. The Center also runs an Innovation and Enterprise Unit that facilitates the protection and exploitation of the Center’s research and technologies. Fleming operates its own Animal House, which can house up to 15,000 mice, and has its own complete mouse histopathology unit. Fleming’s Animal house (certified with ISO 9001) provides husbandry of animals and services to the biomedical research community since 2001. It covers an area of approximately 600 m2 within the Center and is equipped with highly automated systems that provide the best possible conditions for mouse reproduction and maintenance. Its main activity is the reproduction and maintenance of mice stocks either of inbred strains or genetically engineered mice, such as transgenic and knockout mouse lines, as well as chemically induced mutants developed by Fleming researchers. The Animal House has a capacity to house more than 18,000 mice and is currently the largest Mouse Unit in Greece in terms of number and variety of mice. The Facility became a full member of EMMA in 2009. Main areas of research: Functional genomics and proteomics; Molecular and cellular immunology; Animal models of human disease; Transcriptional and post-transcriptional mechanisms of gene regulation; DNA repair; Stem Cell differentiation; Epigenetics; Learning and memory; ECM biology. Fields of excellence: Molecular mechanisms of disease (inflammation, cancer, metabolic syndrome, CNS disorders). /system/content_providers/images/000/000/051/original/logo.png?1469458221
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