Content Providers
Keywords: Bioinformatics tools or DNA-seq or Data Analysis or Data policies or Education or Galaxy or learning management system
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GTN
The GTN is a global community of teachers, trainers, developers, administrators, and learners based around the Galaxy Platform!
For Learners
Our community provides over 370 high quality, peer-reviewed training materials...698 training materials26 events (12 past events)GTN https://training.galaxyproject.org/ https://tess.elixir-europe.org/content_providers/galaxy-training The GTN is a global community of teachers, trainers, developers, administrators, and learners based around the [Galaxy Platform](https://galaxyproject.org)! **For Learners** Our community provides over [370 high quality](https://training.galaxyproject.org/), peer-reviewed training materials from a global community of [330 instructors](https://training.galaxyproject.org/training-material/hall-of-fame/), with a focus on reproducibility and [FAIRness](https://training.galaxyproject.org/training-material/faqs/gtn/fair_training.html). **Not Just Galaxy** We've expanded our content to include data science, software development, and even alternative <abbr title="scientific workflow management systems">SciWMSs</abbr> like snakemake! **For Teachers** All of our materials are [FAIR](https://training.galaxyproject.org/training-material/faqs/gtn/fair_training.html), and we put a lot of effort into the platform's [accessibility for all audiences.](https://training.galaxyproject.org/accessibility.html). If you're interested in [contributing your own materials](https://training.galaxyproject.org/training-material/topics/contributing/) we'd love to help you share them with the world! Most of our materials are licensed CC-BY-SA so you're welcome to use these materials for your own course and classes! If you want to use a specific version of a material you may be interested in accessing them via [our archive](https://training.galaxyproject.org/archive/). **For Administrators** If you're a budding Galaxy Administrator, or an experienced one looking to catch up, the GTN is the source for all of those materials. We also work to make it easy for you as an admin to support tutorials on your infrastructure, you'll find a list of tools and their installation instructions at the bottom of every tutorial. /system/content_providers/images/000/000/078/original/GTN-400px.png?1718821926 -
Galaxy Project
There are many approaches to learning how to use Galaxy. The most popular is probably to just dive in and use it. Galaxy is simple enough to use that you can do many analyses just by exploring the interface. However, you may miss much of the power this way.
0 events (535 past events)Galaxy Project https://galaxyproject.org/events https://tess.elixir-europe.org/content_providers/galaxy-project There are many approaches to learning how to use Galaxy. The most popular is probably to just dive in and use it. Galaxy is simple enough to use that you can do many analyses just by exploring the interface. However, you may miss much of the power this way. /system/content_providers/images/000/000/094/original/galaxyproject.png?1530281075 -
ELIXIR Norway
6 training materials0 events (22 past events)ELIXIR Norway http://elixir-norway.org https://tess.elixir-europe.org/content_providers/elixir-norway /system/content_providers/images/000/000/087/original/elixir_norway_white_background.png?1530281111 -
ELIXIR-SI eLearning Platform (EeLP)
ELIXIR-SI eLearning Platform (EeLP) is a learning management system (LMS) continuously administered and maintained by ELIXIR Slovenia.
EeLP enables all-in-one-place access to materials, tools and services for any course, tutorial or webinar that is hosted on the platform.
6 training materials0 events (8 past events)ELIXIR-SI eLearning Platform (EeLP) https://elixir.mf.uni-lj.si/ https://tess.elixir-europe.org/content_providers/elixir-si-elearning-platfrom-eelp ELIXIR-SI eLearning Platform (EeLP) is a learning management system (LMS) continuously administered and maintained by ELIXIR Slovenia. EeLP enables all-in-one-place access to materials, tools and services for any course, tutorial or webinar that is hosted on the platform. /system/content_providers/images/000/000/108/original/eelp-logo-with-slogan.jpg?1544007788 -
University of Leicester Bioinformatics and Biostatistics Analysis Support Hub (BBASH)
The ongoing development of next generation sequencing (NGS) technologies has meant that vast amounts of sequencing data is being produced, with researchers increasingly wanting the capability and knowledge to analyse their own data. Over the past 3 years BBASH has developed a number of 1, 2 and...
0 events (2 past events)University of Leicester Bioinformatics and Biostatistics Analysis Support Hub (BBASH) https://www2.le.ac.uk/colleges/medbiopsych/facilities-and-services/cbs/bbash https://tess.elixir-europe.org/content_providers/university-of-leicester-bioinformatics-and-biostatistics-analysis-support-hub-bbash The ongoing development of next generation sequencing (NGS) technologies has meant that vast amounts of sequencing data is being produced, with researchers increasingly wanting the capability and knowledge to analyse their own data. Over the past 3 years BBASH has developed a number of 1, 2 and 3 day hands-on, NGS analysis workshops designed specificially to meet the needs of laboratory based researchers with little or no experience of NGS data analysis and command line tools. The workshops are held at the University of Leicester's state of the art College Court Conference Centre and consist of introductory presentations followed by practical sessions where delegates will gain hands-on experience of analysing and interpreting real data. The BBASH trainers are University of Leicester bioinformaticians or researchers with many years experience in bioinformatics and bioinformatics training, having delivered many workshops across the UK and Europe. /system/content_providers/images/000/000/086/original/BBASHlogo.png?1509536575 -
FAIRsharing
FAIRsharing is a web-based, searchable portal of three interlinked registries, containing both in-house and crowdsourced manually curated descriptions of standards, databases and data policies, combined with an integrated view across all three types of resource. By registering your resource on...
1 training materialFAIRsharing https://www.fairsharing.org https://tess.elixir-europe.org/content_providers/fairsharing FAIRsharing is a web-based, searchable portal of three interlinked registries, containing both in-house and crowdsourced manually curated descriptions of standards, databases and data policies, combined with an integrated view across all three types of resource. By registering your resource on FAIRsharing, you not only gain credit for your work, but you increase its visibility outside of your direct domain, so reducing the potential for unnecessary reinvention and proliferation of standards and databases. /system/content_providers/images/000/000/109/original/FAIRsharing_logo.png?1544089458 -
Seqera Labs
Founded by the creators of Nextflow, Seqera Labs mission is to foster the adoption of professional open source software and strengthen the community effort around the Nextflow ecosystem.
We organize training events for your team or organization. These are intended for...
0 events (1 past event)Seqera Labs http://www.seqera.io https://tess.elixir-europe.org/content_providers/seqera-labs Founded by the creators of [Nextflow](http://www.nextflow.io), Seqera Labs mission is to foster the adoption of professional open source software and strengthen the community effort around the Nextflow ecosystem. We organize training events for your team or organization. These are intended for anyone who wishes to learn about the technology, starting from basic through to advanced concepts. Our most popular intensive two-day course includes topics on containerization, cloud deployment, Git integration and best practices for reproducibility. /system/content_providers/images/000/000/111/original/Seqera_Labs_-_grey.png?1553771707 -
H3ABioNet
H3ABioNet is a Pan African Bioinformatics Network for the Human Heredity and Health in Africa (H3Africa) consortium.
H3ABioNet was established to develop bioinformatics capacity in Africa and specifically to enable genomics data analysis by H3Africa researchers across the continent. H3ABioNet...0 events (1 past event)H3ABioNet https://h3abionet.org https://tess.elixir-europe.org/content_providers/h3abionet H3ABioNet is a Pan African Bioinformatics Network for the Human Heredity and Health in Africa (H3Africa) consortium. H3ABioNet was established to develop bioinformatics capacity in Africa and specifically to enable genomics data analysis by H3Africa researchers across the continent. H3ABioNet is developing human capacity through training and support for data analysis, and facilitating access to informatics infrastructure by developing or providing access to pipelines and tools for human, microbiome and pathogen genomic data analysis. /system/content_providers/images/000/000/803/original/LOGO-HEADER-2.png?1726047187 -
University of Ljubljana, Faculty of Medicine
Faculty of Medicine is part of University of Ljubljana, the oldest and largest institution of higher education in Slovenia. The faculty carries out research and provides training in the fields of medicine, dental medicine and life sciences.
University of Ljubljana, Faculty of Medicine https://www.mf.uni-lj.si/en https://tess.elixir-europe.org/content_providers/university-of-ljubljana-faculty-of-medicine Faculty of Medicine is part of University of Ljubljana, the oldest and largest institution of higher education in Slovenia. The faculty carries out research and provides training in the fields of medicine, dental medicine and life sciences. /system/content_providers/images/000/000/104/original/mf-znal.png?1539848321 -
Workflow4metabolomics
In the context of collaboration between metabolomics (MetaboHUB French infrastructure) and bioinformatics platforms (IFB: Institut Français de Bioinformatique), we have developed full LC/MS, FIA-MS, GC/MS and NMR pipelines using Galaxy framework for data analysis including preprocessing,...
Workflow4metabolomics https://workflow4metabolomics.org https://tess.elixir-europe.org/content_providers/workflow4metaolomics In the context of collaboration between metabolomics (MetaboHUB French infrastructure) and bioinformatics platforms (IFB: Institut Français de Bioinformatique), we have developed full LC/MS, FIA-MS, GC/MS and NMR pipelines using Galaxy framework for data analysis including preprocessing, normalization, quality control, statistical analysis (Univariate, Multivariate PLS/OPLS) and annotation steps. Those modular and extensible workflows are composed with existing components (XCMS and CAMERA packages, etc.) but also a whole suite of complementary homemade tools. This implementation is accessible through a web interface, which guarantees the parameters completeness. The advanced features of Galaxy have made possible the integration of components from different sources and of different types. Thus, an extensible Virtual Research Environment (VRE) is offered to metabolomics communities (platforms, end users, etc.), and enables preconfigured workflows sharing for new users, but also experts in the field. /system/content_providers/images/000/000/659/original/17082156.png?1667905557