Workflows
Scientific topics: Data management or Phylogeny or Protein folds and structural domains or Protein structure analysis or Regulatory RNA
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FAIR game plan
Workflow describing the steps of the FAIR game, which can be implemented in multiple ways.
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Homology Modelling with SWISS-MODEL
This is the workflow of homology modelling with the SWISS-MODEL expert system
SWISS-MODEL is a web-based integrated service dedicated to protein structure homology modelling. It guides the user in building protein homology models at [different levels of...
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Phylogeny.fr "One Click" phylogeny
Phylogeny.fr is a free, simple to use web service dedicated to reconstructing and analysing phylogenetic relationships between molecular sequences.
Phylogeny.fr runs and connects various bioinformatics programs to reconstruct a robust phylogenetic tree from a set of sequences.The "one click"...
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Plant phenotyping and plant genomic data management
A learning path set for plant phenotyping and plant genomic data management with 4 domains : FAIR essentials, plant biological material, plant phenotyping experiment and omics experiments. At the end of the learning path, researchers or data managers specialized in plant research are able to :
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TRUFA RNAseq
TRUFA (Transcriptomes User-Friendly Analysis) is a free webserver designed to help you perform RNA-seq analysis.
So far, TRUFA is allowing you to execute the following steps (programs used are specified in the parentheses):
Reads cleaning:
Reads quality control (FASTQC)
Quality trimming...