Plant phenotyping and plant genomic data management

A learning path set for plant phenotyping and plant genomic data management with 4 domains : FAIR essentials, plant biological material, plant phenotyping experiment and omics experiments. At the end of the learning path, researchers or data managers specialized in plant research are able to :
- retrieve metadata for the biological materials of their interest
- retrieve unique identifiers for their samples from BioSamples
- retrieve MIAPPE compliant metadata on phenotyping experiments
- publish MIAPPE compliant metadata on phenotyping experiments in the recommended databases
- create new ontologies/vocabularies on CropOntology for their projects
- retrieve metadata on omics experiments
- publish metadata on omics experiments in the recommended databases
- use tools to version their metadata curation before publication

Keywords: Phenotype, Genomics, Data management, FAIR, Plant

Authors: Vanita Haurheeram, ELIXIR training platform, Célia Michotey, Cyril Pommier, Anne-Françoise Adam-Blondon

Scientific topics: Data management, Plant biology, Phenomics, Genomics, FAIR data


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