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Showing 5 events
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Workshops and courses
Introduction to RNA-seq and functional interpretation
9 - 13 February 2026
Online
RNA-Seq analysis Function analysis Gene expression profile RNA-Seq Transcriptome assembly Transcriptomics Gene transcripts -
Workshops and courses
Single-cell RNA-seq analysis with Python
2 - 6 February 2026
Online
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Workshops and courses
Introduction to bulk RNA-Seq: From Quality Control to Pathway Analysis
22 - 23 September 2025
Basel, Switzerland
Face-to-face
functional genomics genes and genomes next generation sequencing transcriptomics training torsten schwede & thierry sengstag group -
Workshops and courses
Introduction to bulk RNA-Seq: From Quality Control to Pathway Analysis
25 - 26 September 2025
Basel, Switzerland
Face-to-face
functional genomics genes and genomes next generation sequencing transcriptomics training torsten schwede & thierry sengstag group
Showing 30 materials
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Carpentries style curriculum
Introduction to Workflows with Common Workflow Language
• beginnerWorkflows RNA-Seq analysis cwl commonwl sciworkflows workflows -
RNA-Seq Analysis
•• intermediateRNA-Seq -
RNA-seq Analysis 2014 Module 1 - Introduction to RNA-seq Analysis
Experimental design rna seq Igv Introduction rna seq analysis
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Recorded webinar
Single cell RNA-seq analysis using a Galaxy interface
RNA-Seq
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course materials, Video
Single cell RNA-seq data analysis with Chipster
• beginnerRNA-Seq RNA-Seq Single Cell technologies scRNA-seq -
course materials
Single-cell RNA-seq data analysis with R 2022
•• intermediateRNA-Seq RNA-Seq Single Cell technologies scRNA-seq -
Detecting differentially expressed genes with RNA-seq 11.9.2019
RNA-Seq
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Tutorial
A Tidy Transcriptomics introduction to RNA-Seq analyses
• beginnerRNA-Seq Differential Expression Gene Expression RNA-seq Transcriptomics -
course materials, Video
RNA-seq data analysis
• beginnerRNA-Seq -
course materials, Video
Virus detection using small RNA-seq
• beginnerRNA-Seq -
RNA-Seq Lab: Workflow -- gene-level exploratory analysis and differential expression
RNA-Seq
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nih-cfde/training-and-engagement
RNA-Seq Snakemake General Python Unix/Linux RNA-seq Cloud computing
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Sydney-Informatics-Hub/rnaseq-workshop-2023
RNA-Seq Nextflow R RNA-seq
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Slideshow, Training materials
Prediction of protein structures and complexes with AlphaFold on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction Structure visualisation Multiple sequence alignment AlphaFold Database (13181) -
hbctraining/DGE_workshop_salmon_online
RNA-Seq Transcriptomics RNA-seq
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hbctraining/Intro-to-rnaseq-hpc-salmon-flipped
RNA-Seq Transcriptomics RNA-seq
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hbctraining/Intro-to-DGE
RNA-Seq Transcriptomics RNA-seq
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stemangiola/bioc_2020_tidytranscriptomics
RNA-Seq Transcriptomics R RNA-seq
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carpentries-incubator/bioc-rnaseq
RNA-Seq Transcriptomics R RNA-seq
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GTPB/ADER19F
RNA-Seq Transcriptomics R RNA-seq
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XueyiDong/RNAseq123workshop
RNA-Seq Transcriptomics RNA-seq
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NBISweden/workshop-spatial
RNA-Seq Transcriptomics Python RNA-seq Spatial transcriptomics
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biocorecrg/RNAseq_course_2019
RNA-Seq Transcriptomics RNA-seq
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bioinformatics-ca/RNA_2021
RNA-Seq Transcriptomics RNA-seq
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bioinformatics-core-shared-training/Bulk_RNASeq_Course_Nov21
RNA-Seq Transcriptomics RNA-seq
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ucdavis-bioinformatics-training/2022-December-Spatial-Transcriptomics
RNA-Seq Transcriptomics R RNA-seq Spatial transcriptomics
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bioinformaticsdotca/PNA_2023
RNA-Seq Transcriptomics RNA-seq
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hbctraining/Intro-to-bulk-RNAseq
RNA-Seq Transcriptomics RNA-seq
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julien-roux/SIB_days_2024_workshop_EDI
RNA-Seq Transcriptomics Reproducibility Quarto RNA-seq
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ucdavis-bioinformatics-training/2023-June-RNA-Seq-Analysis
RNA-Seq Transcriptomics R RNA-seq
Showing 4 content providers
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University of Leicester Bioinformatics and Biostatistics Analysis Support Hub (BBASH)
The ongoing development of next generation sequencing (NGS) technologies has meant that vast amounts of sequencing data is being produced, with researchers increasingly wanting the capability and knowledge to analyse their own data. Over the past 3 years BBASH has developed a number of 1, 2 and...
0 events (2 past events)University of Leicester Bioinformatics and Biostatistics Analysis Support Hub (BBASH) https://www2.le.ac.uk/colleges/medbiopsych/facilities-and-services/cbs/bbash https://tess.elixir-europe.org/content_providers/university-of-leicester-bioinformatics-and-biostatistics-analysis-support-hub-bbash The ongoing development of next generation sequencing (NGS) technologies has meant that vast amounts of sequencing data is being produced, with researchers increasingly wanting the capability and knowledge to analyse their own data. Over the past 3 years BBASH has developed a number of 1, 2 and 3 day hands-on, NGS analysis workshops designed specificially to meet the needs of laboratory based researchers with little or no experience of NGS data analysis and command line tools. The workshops are held at the University of Leicester's state of the art College Court Conference Centre and consist of introductory presentations followed by practical sessions where delegates will gain hands-on experience of analysing and interpreting real data. The BBASH trainers are University of Leicester bioinformaticians or researchers with many years experience in bioinformatics and bioinformatics training, having delivered many workshops across the UK and Europe. /system/content_providers/images/000/000/086/original/BBASHlogo.png?1509536575 -
ELIXIR Norway
12 training materials0 events (27 past events)ELIXIR Norway http://elixir-norway.org https://tess.elixir-europe.org/content_providers/elixir-norway /system/content_providers/images/000/000/087/original/elixir_norway_white_background.png?1530281111 -
Jalview
Jalview (www.jalview.org) is free-to-use sequence alignment and analysis visualisation software that links genomic variants, protein alignments and 3D structure.
Protein, RNA and DNA data can be directly accessed from public databases (e.g. Pfam, Rfam, PDB, UniProt and ENA etc.). Jalview has...
0 events (2 past events)Jalview http://www.jalview.org/ https://tess.elixir-europe.org/content_providers/jalview Jalview (www.jalview.org) is free-to-use sequence alignment and analysis visualisation software that links genomic variants, protein alignments and 3D structure. Protein, RNA and DNA data can be directly accessed from public databases (e.g. Pfam, Rfam, PDB, UniProt and ENA etc.). Jalview has editing and annotation functionality within a fully integrated, multiple window interface. The sequence alignment programs Clustal Omega, Muscle, MAFFT, ProbCons, T-COFFEE, ClustalW, MSA Prob and GLProb can be run directly from within Jalview. Jalview integrates protein secondary structure prediction (JPred), generate trees, assesses consensus and conservation across sequence families. Journal quality figures can be generated from the results. The Jalview Desktop will run on Mac, MS Windows, Linux and any other platform that supports Java. It has been developed in Geoff Barton's group (www.compbio.dundee.ac.uk) in the School of Life Sciences (www.lifesci.dundee.ac.uk) at the University of Dundee with funding from the BBSRC and the Wellcome Trust. /system/content_providers/images/000/000/091/original/logo-boxg.png?1524735946 -
NEOF Training
Bioinformatics courses
We provide training courses to support a range of capabilities including, for example, genome assembly, metabarcoding, population genomics and RNA sequencing. We aim to support the training that is in most demand from our community.These are some of the training...
0 events (5 past events)NEOF Training https://neof.org.uk/training/ https://tess.elixir-europe.org/content_providers/neof-training Bioinformatics courses We provide training courses to support a range of capabilities including, for example, genome assembly, metabarcoding, population genomics and RNA sequencing. We aim to support the training that is in most demand from our community. These are some of the training courses we are running online in 2021 and 2022. Our plan is to deliver these courses online until further notice, and we hope to be running workshops in person in future. Registration closes on Monday at noon 2 weeks prior to the start of each course; selected attendees are then invited to confirm their attendance. If you have not heard from us then, please check your spam folder in case the message is there. /system/content_providers/images/000/000/638/original/neof.png?1644251203