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Showing 30 materials
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e-learning
Data Manipulation Olympics
• beginnerSoftware engineering Introduction to Galaxy Analyses cyoa -
Webinar
Ontology Lookup Service (OLS)
Ontology and terminology
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Sal's old statistics videos
Descriptive statistics
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e-learning
Data Manipulation Olympics - SQL
• beginnerSoftware engineering Foundations of Data Science cyoa jupyter-notebook sql -
e-learning
Data Manipulation Olympics - JQ
• beginnerSoftware engineering Foundations of Data Science cyoa json -
e-learning
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
presentation
Ready for BioData Management? Intensive slide deck
Data management RDM RDMkit data stewardship Data Stewardship Wizard FAIR
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e-learning
Version Control with Git
• beginnerSoftware engineering Foundations of Data Science -
Lecture Computational Proteomics and Metabolomics
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Introduction to label-free Quantitative Proteomics
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Introduction to non-targeted metabolomics
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Introduction to Qualitative Proteomics
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trekhleb/learn-python
Python script Python
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AlphaFold2 - ML revolution in structural biology
protein-3D-structure Structural genomics Machine learning Alphafold AlphaFold Database (13181)
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course materials, Training materials, Slides
ELIXIR TtR course: Basic genomics using advanced analysis tools
• beginnerGenomics Galaxy training eLearning EeLP -
Tutorial
MGnify quick tour
Metagenomics Sequence analysis MGnify Microbiology
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lessons
Andmehaldus 101
• beginnerData management Data Management Plan -
e-learning
Optimizing DNA Sequences for Biological Functions using a DNA LLM
•• intermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook work-in-progress -
presentation
Computational Tools and Resources Workshop
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Presentation
Data publishing and archival
• beginnerData publishing data archiving Data preserving -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 2, Infrastructure for storing and sharing data
• beginnerData management FAIR data Data analysis Data handling Data processing Data sharing -
e-learning
Fine-tuning a LLM for DNA Sequence Classification
•• intermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
e-learning
Pretraining a Large Language Model (LLM) from Scratch on DNA Sequences
•• intermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
e-learning
Predicting Mutation Impact with Zero-shot Learning using a pretrained DNA LLM
•• intermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
e-learning
Generating Artificial Yeast DNA Sequences using a DNA LLM
•• intermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
Video
Data harmonization and enrichment using EMBL-EBI ontology tools
• beginnerData management Data curation and archival Ontology and terminology CINECA data harmonization Annotation Ontologies -
Simple plotting in R
Bioinformatics Microarray data analysis Plotting data R Visualisation
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e-learning
Understanding Barcodes
• beginnerTranscriptomics Single Cell -
video
RDMbites | Metadata: where to find published ontologies
RDM data management
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tutorial
TeSS, how can I help you?
• beginnerFAIR OPEN Bioinformatics Teaching TeSS
Showing 3 content providers
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OLS
OLS runs Open Seeds, a mentoring & training program for Open Science ambassadors. As part of this program, 100+ experts gave talks on several aspects of Open Science and Open Leadership. The videos from these talks, with captions, are referenced and made available through OLS website
OLS https://openlifesci.org/ https://tess.elixir-europe.org/content_providers/ols OLS runs Open Seeds, a mentoring & training program for Open Science ambassadors. As part of this program, 100+ experts gave talks on several aspects of Open Science and Open Leadership. The videos from these talks, with captions, are referenced and made available through OLS website /system/content_providers/images/000/000/694/original/ols-white-bg.png?1699890983 -
University of Ljubljana, Faculty of Medicine
Faculty of Medicine is part of University of Ljubljana, the oldest and largest institution of higher education in Slovenia. The faculty carries out research and provides training in the fields of medicine, dental medicine and life sciences.
University of Ljubljana, Faculty of Medicine https://www.mf.uni-lj.si/en https://tess.elixir-europe.org/content_providers/university-of-ljubljana-faculty-of-medicine Faculty of Medicine is part of University of Ljubljana, the oldest and largest institution of higher education in Slovenia. The faculty carries out research and provides training in the fields of medicine, dental medicine and life sciences. /system/content_providers/images/000/000/104/original/mf-znal.png?1539848321 -
ELIXIR: The Czech Republic Node
ELIXIR CZ is the Czech Republic node of ELIXIR. It joins universities (Masaryk University Brno, Palacký University Olomouc, Charles University, University of Chemistry and Technology, Czech Technical University, University of West Bohemia and University of South Bohemia), research institutes...
4 training materials0 events (34 past events)ELIXIR: The Czech Republic Node http://www.elixir-czech.cz https://tess.elixir-europe.org/content_providers/elixir-the-czech-republic-node ELIXIR CZ is the Czech Republic node of ELIXIR. It joins universities (Masaryk University Brno, Palacký University Olomouc, Charles University, University of Chemistry and Technology, Czech Technical University, University of West Bohemia and University of South Bohemia), research institutes (Czech Academy of Sciences, namely Institute of Organic Chemistry and Biochemistry, Institute of Molecular Genetics, Institute of Microbiology, Institute of Biotechnology and Biology Centre), IT infrastructures (CESNET) and University Hospital at Saint Anna in Brno. /system/content_providers/images/000/000/082/original/ELIXIR_CZECHREPUBLIC_white_background_small.png?1507879746