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Showing 17 materials
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carpentries-incubator/singularity-introduction
Containerization Singularity
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Docker and Singularity for reproducible research: getting started with containers - Apr 2022
Docker Singularity
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Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
sib-swiss/containers-introduction-training
Containerization Docker Singularity
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vib-tcp/containers-workshop
Containerization Docker Singularity
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awesome-workshop/docker-singularity-hats
Containerization Docker Singularity
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Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow -
biocorecrg/ELIXIR_containers_nextflow
Workflows Nextflow
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hands-on tutorial
Hands-on for 'Use Singularity containers for running Galaxy jobs' tutorial
admin jobs ansible git-gat
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sib-swiss/containers-snakemake-training
Workflows Containerization Docker Singularity Snakemake
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PerMedCoE/mpi-in-container
Containerization Docker High performance computing Singularity
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Presentation, course materials
Introduction to Nextflow workshop
• beginnerWorkflows Nextflow DSL2 -
Docker and Singularity for Reproducible Research: Getting Started with Containers
• beginnerreproducibility container data management data security high-performance computing -
Recorded webinar
Introduction to pangenomes and why they are worth exploring
Genomics
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Functional-Genomics-Lab/Applied-Genomics
ChIP-seq Epigenetics Genomics RNA-Seq Variant pattern analysis Containerization High performance computing Nextflow Singularity Reproducibility …
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Introduction to Containers and Snakemake for Reproducible Research
• beginnercontainer data management high-performance computing reproducibility workflows marc robinson-rechavi group training -
Reproducible and Scalable Research with Snakemake and Software Containers
• beginner
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