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  3. ELIXIR SIS-Containers - collection of training materials

Collection

ELIXIR SIS-Containers - collection of training materials

Training resources (material and courses) on reproducible containers and workflows, providing a wide range of topics from design to implementation and deployment.

This collection has been compiled in the framework of the ELIXIR Strategic Implementation Study “Making container services integratable, sustainable and widely adopted”.

Keywords

Reproducibility, Containers, Workflows, Cloud, Docker, CWL, Singularity, kubernetes

Owner

alloza (Eva Alloza Anguiano)

Collaborators

fpsom (Fotis Psomopoulos)
galvaro (Alvaro Gonzalez)
  • Materials (10)
  • Events (0)
Showing 10 materials
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  • 1

    Carpentries style curriculum

    Introduction to Workflows with Common Workflow Language

    ELIXIR node event
    • beginner
    Workflows RNA-Seq analysis cwl commonwl sciworkflows workflows
  • 2

    Training materials

    Containers & Workflow pipelines workshop

    ELIXIR node event
    •• intermediate
    Containers Nextflow
  • 3

    Presentation, course materials

    Introduction to Nextflow workshop

    ELIXIR node event
    • beginner
    Workflows Nextflow DSL2
  • 4

    Training materials

    FAIR principles applied to bioinformatics

    ELIXIR node event
    •• intermediate
    FAIR Reproducible Science Open science Data analysis Data processing
  • 5

    Slides, course materials

    Introduction to using cloud and containers for training - OpenStack and Docker oriented view

    ELIXIR node event
    Cloud computing Containers
  • 6

    Slides

    Galaxy Server administration - Docker and Galaxy

  • 7

    Docker for Beginners

    ELIXIR node event
    Docker
  • 8

    Introduction to using containers - OpenShift, Kubernetes and Docker oriented view

    ELIXIR node event
    • beginner
    Containers Kubernetes Cloud computing
  • 9

    Online material, hands-on tutorial

    Introduction to Docker and Singularity

    ELIXIR node event
    • beginner
    Reproducibility Container Singularity
  • 10

    Training materials

    NBIS Reproducible research course

    ELIXIR node event
    data management Reproducibility Data analysis
Showing 0 events

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TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.