Training materials
Tools: Bioconductor or BridgeDb or COBREXA.jl or ChEBI or Cufflinks or PLAZA monocots or Zooma
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Blog post
Making BridgeDb Derby files with Groovy
•• intermediateBridgeDb Groovy -
lessons, e-learning
Introduction to Data Management Practices - Metadata
• beginnerData management FAIR data data organisation FAIR CONVERGE ontologies metadata Controlled vocabularies -
Tutorial
Tutorials on COBREXA
•• intermediatePersonalised medicine Simulation experiment Modelling and simulation cell-level simulations Biomodelling HPC -
Identifier mapping with Cytoscape
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Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Video
Data harmonization and enrichment using EMBL-EBI ontology tools
• beginnerData management Data submission, annotation, and curation Ontology and terminology CINECA data harmonization Annotation Ontologies -
Liftr & sbgr
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Talk
Discussion: Guidelines for submitting data to ExperimentHub
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Talk
HCA Data Access
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Talk
Single cell updates