Training materials
Tools: Bioconductor or BridgeDb or CDK Depict or COBREXA.jl or Cufflinks or InterMine or ORGANISMS or edgeR
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Blog post
Making BridgeDb Derby files with Groovy
•• intermediateBridgeDb Groovy -
Tutorial
Tutorials on COBREXA
•• intermediatePersonalised medicine Simulation experiment Modelling and simulation cell-level simulations Biomodelling HPC -
Identifier mapping with Cytoscape
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Tutorial
A Tidy Transcriptomics introduction to RNA-Seq analyses
• beginnerRNA-Seq Differential Expression Gene Expression RNA-seq Transcriptomics -
Liftr & sbgr
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Talk
Discussion: Guidelines for submitting data to ExperimentHub
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Talk
HCA Data Access
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Talk
Single cell updates
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Talk
Pitfalls and best practices for serializing Bioconductor objects
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Talk
Introduction to DataFrames and the impact of recent changes