Training materials
Tools: BEDTools or Bioconductor or BridgeDb API or CARNIVAL or ORGANISMS or TargetMine or ViralZone
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Tutorial
From transcriptomics to mechanistic models of signalling
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e-learning
ViralZone: Studying viral diversity
• beginnerVirology Genomics Molecular biology virology -
Pan genomics tutorial using Minima2 and seq-seq-pan
• beginnerpan genomics genome alignment Minimap2 alignment seq-seq-pan R visualization genome alignment -
e-learning
Retrieve and list information on SARS-CoV-2 from ViralZone
• beginnerVirology Molecular biology SARS-CoV-2 -
Tutorial
Tutorial on CARNIVAL
•• intermediateMolecular interactions, pathways and networks Gene expression Omics RNA-Seq Network analysis RNA-Seq analysis HPC Signaling RNAseq, transcriptomics -
Liftr & sbgr
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Talk
Discussion: Guidelines for submitting data to ExperimentHub
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Talk
HCA Data Access
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Talk
Single cell updates
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Talk
Pitfalls and best practices for serializing Bioconductor objects