Training materials
Target audience: Post Docs or beginner bioinformaticians or bioinformaticians or geneticists or research software engineers and researchers wri... or software engineers or teachers
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online course, Online material
Tools and Practices for FAIR Research Software
• beginnerFAIR FAIR Research Software -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
podcast, slides
Byte-sized RSE Session 4: Continuous Integration
•• intermediateRSE Research software continuous integration coding skills -
podcast, slides
RSE Byte-sized RSE Session 2: Collaboration and Code Review via GitHub
•• intermediateRSE Research software code review -
podcast, slides
RSE Byte-sized RSE Session 1: Software Licensing
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slides, R Shiny application
Proteomics Data Analysis (PDA)
•• intermediateProteomics proteomics quantitative proteomics -
course materials, online course, Training materials
Cloud-SPAN Prenomics
• beginnerBioinformatics Software engineering Genomics Query and retrieval Data handling Cloud computing Shell Command line Amazon Web Services genomics HPC Data analysis bioinformatics -
Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow -
Course design: Considerations for trainers – a Professional Guide
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Slides
FAIR data - Module 4 (share and publish data)
• beginnerBioinformatics Biology Data management data sharing Data publishing legal framework data warehouse licensing data reuse