Training materials
Target audience: Bachelor students or Novice or Post Docs or Research Scientists or biologists or medical students or postdoctoral researchers
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hands-on tutorial
R introduction
• beginnerR script Software engineering data visualisation programming -
e-learning
Introduction to Linux command line
• beginnerOperating system name Linux -
Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
e-learning
Basic statistics in Prism
• beginnerStatistics and probability statistics -
e-learning
Basic statistics theory
• beginnerStatistics and probability statistics -
slides, scripts
Bioinformatics for Proteomics
• beginnerProteomics -
slides, R Shiny application
Proteomics Data Analysis (PDA)
•• intermediateProteomics proteomics quantitative proteomics -
Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
course materials, online course, Training materials
Cloud-SPAN Prenomics
• beginnerBioinformatics Software engineering Genomics Query and retrieval Data handling Cloud computing Shell Command line Amazon Web Services genomics HPC Data analysis bioinformatics