Training materials
Target audience: Anyone interested in data standardization and/o... or Biologists, Genomicists, Computer Scientists or Intermediate or beginner bioinformaticians or geneticists or plant researchers or research software engineers and researchers wri...
-
Online material, online course
Workshop on Resources for Plant Sciences, 2023
•• intermediatePlant biology service bundle eLearning EeLP plant science Data Visualization Gene Ontology Knowledge graph MIAPPE -
podcast, slides
Byte-sized RSE Session 4: Continuous Integration
•• intermediateRSE Research software continuous integration coding skills -
podcast, slides
RSE Byte-sized RSE Session 2: Collaboration and Code Review via GitHub
•• intermediateRSE Research software code review -
podcast, slides
RSE Byte-sized RSE Session 1: Software Licensing
-
Video, Slides
Plant Phenotyping Data managment Webinar (MIAPPE)
• beginnerPlant biology Phenomics Data quality management Data submission, annotation, and curation Standardisation and normalisation -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Useful ontologies for harmonizing cohort data
• beginnerData integration and warehousing Data management Ontology and terminology Ontologies Cohort data data annotation -
Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Formatting Plant Phenotyping Data-format data sharing -
Webinar, e-learning
Education and Training webinars on genetic tumor risk syndromes (ERN GENTURIS)
••• advancedRare diseases Rare Diseases & Research -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling