Training materials
Target audience: Anyone interested in bioinformatics or Anyone interested in data standardization and/o... or General Interest or Intermediate or Master students or Ontologists or PI
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How to make your messy data usable? / OpenRefine
• beginnerData management Data quality management Data exploration data quality Data validation data cleaning -
Slides
Life Sciences Research Data Management 2023 Course by ELIXIR Norway
• beginnerData management Data submission, annotation, and curation Data handling Deposition Data retrieval -
lessons
Visualisation with RStudio
• beginnerData visualisation Data Visualization R RStudio ggplot2 -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
Presentation
Data publishing and archival
• beginnerData publishing data archiving Data preserving -
Series of videos, Video, youtube video
Introduction to research data management, data management planning and services provided by CSC – IT Center for Science
• beginnerDMP RDM plan research data management data management data management plan ELIXIR-CONVERGE CONVERGE -
Presentation
Practicalities of data handling
• beginnerData security Data acquisition Data management Data handling data encryption data protection setup checksums Data transfer Data storage data organisation -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Useful ontologies for harmonizing cohort data
• beginnerData integration and warehousing Data management Ontology and terminology Ontologies Cohort data data annotation