Training materials
Standard database or policy: Ensembl or FAIR sharing or Minimum Information about Plant Phenotyping Exp... or OBO Foundry or Protein Data Bank in Europe or STRING: functional protein association networks or Simplified Molecular Input Line Entry Specifica...
-
Video
Overview of the FAIRsharing.org
• beginnerFAIR data Data management FAIR FAIR principles Data sharing -
Video, Slides
Plant Phenotyping Data managment Webinar (MIAPPE)
• beginnerPlant biology Phenomics Data quality management Data submission, annotation, and curation Standardisation and normalisation -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Useful ontologies for harmonizing cohort data
• beginnerData integration and warehousing Data management Ontology and terminology Ontologies Cohort data data annotation -
Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Formatting Plant Phenotyping Data-format data sharing -
Book
Groovy Cheminformatics with the Chemistry Development Kit
• beginnerCheminformatics Chemistry -
Tutorial, Vignette
BridgeDbR Tutorial
• beginnerELIXIR RIR, BridgeDb -
STRING exercises
• beginnerBioinformatics Molecular interactions, pathways and networks Protein interactions -
Cytoscape stringApp exercises
•• intermediateBioinformatics Molecular interactions, pathways and networks Protein interactions Proteomics Data visualisation -
Ensembl Browser Workshop: Plants and Microbes