Training materials
Standard database or policy: BridgeDb or Chemical Entities of Biological Interest or Genomics England | PanelApp or Identifiers.org Registry or OBO Foundry or Protein Data Bank in Europe or ProteomeXchange or STRING: functional protein association networks
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BridgeDb-Matlab Usage Instructions
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Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Useful ontologies for harmonizing cohort data
• beginnerData integration and warehousing Data management Ontology and terminology Ontologies Cohort data data annotation -
knowledgebase
PanelApp Reviewer’s Guide
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Tutorial, Vignette
BridgeDbR Tutorial
• beginnerELIXIR RIR, BridgeDb -
STRING exercises
• beginnerBioinformatics Molecular interactions, pathways and networks Protein interactions -
Cytoscape stringApp exercises
•• intermediateBioinformatics Molecular interactions, pathways and networks Protein interactions Proteomics Data visualisation