Training materials
Related resources: CanCOGeN or Genomics England PanelApp or Sequence analysis dataset or User Interface and Features dataset or seq-seq-pan
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Pan genomics tutorial using Minima2 and seq-seq-pan
• beginnerpan genomics genome alignment Minimap2 alignment seq-seq-pan R visualization genome alignment -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
knowledgebase
PanelApp Reviewer’s Guide
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Tutorial
User Interface and Features - Jupyter: Use Jupyter notebooks in Galaxy
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Tutorial
Sequence analysis - RAD-Seq to construct genetic maps
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Tutorial
Sequence analysis - RAD-Seq de-novo data analysis
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Tutorial
Sequence analysis - RAD-Seq Reference-based data analysis
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Tutorial
Sequence analysis - Mapping
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Tutorial
Sequence analysis - Quality Control