Sequence analysis - Quality Control

Analyses of sequences

Questions of the tutorial:

  • How to control quality of NGS data?
  • What are the quality parameters to check for each dataset?
  • How to improve the quality of a sequence dataset?

Objectives of the tutorial:

  • Manipulate FastQ files
  • Control quality from a FastQ file
  • Use FastQC tool
  • Understand FastQC output
  • Use tools for quality correction

Resource type: Tutorial

Authors: bebatut

External resources:
Sequence analysis - Quality Control https://tess.elixir-europe.org/materials/analysis-of-sequences-quality-control Analyses of sequences Questions of the tutorial: - How to control quality of NGS data? - What are the quality parameters to check for each dataset? - How to improve the quality of a sequence dataset? Objectives of the tutorial: - Manipulate FastQ files - Control quality from a FastQ file - Use FastQC tool - Understand FastQC output - Use tools for quality correction