Training materials
Related resources: Assembly dataset or Genomics England PanelApp or MetaboLights or RStudio basic course or User Interface and Features dataset or Variant Analysis dataset or recorded presentation on integration of ELNs in...
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lessons
Visualisation with RStudio
• beginnerData visualisation Data Visualization R RStudio ggplot2 -
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Presentation, hackathon
ELN basics training materials
• beginner -
knowledgebase
PanelApp Reviewer’s Guide
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Tutorial
User Interface and Features - Jupyter: Use Jupyter notebooks in Galaxy
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Tutorial
Assembly - Making sense of a newly assembled genome
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Tutorial
Variant Analysis - Mapping and molecular identification of phenotype-causing mutations
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Tutorial
Variant Analysis - Microbial Variant Calling
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Tutorial
Variant Analysis - Calling variants in non-diploid systems
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Tutorial
Assembly - Unicycler Assembly
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