Training materials
Related resources: ARROWSMITH or Data Visualisation (theory) or Galaxy Server administration slides or Genomics England PanelApp or Introduction to Galaxy dataset or Next generation biobanking ontology (NGBO) or Public Health Alliance for Genomic Epidemiology
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lessons
Visualisation with RStudio
• beginnerData visualisation Data Visualization R RStudio ggplot2 -
Video
Annotating data using next generation biobanking ontology (NGBO)
• beginnerData integration and warehousing Ontology and terminology Standards Ontologies Data Integration data harmonization Standardised vocabulary -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
knowledgebase
PanelApp Reviewer’s Guide
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Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
Tutorial
Galaxy Server administration - Connecting Galaxy to a compute cluster
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Tutorial
Introduction to Galaxy Analyses - From peaks to genes