Galaxy Server administration - Connecting Galaxy to a compute cluster

Resources related to configuration and maintenance of Galaxy servers

Questions of the tutorial:

  • How to connect Galaxy to a compute cluster?
  • How can I configure job dependent resources, like cores, memory for my DRM?

Objectives of the tutorial:

  • Be familiar with the basics of installing, configuring, and using Slurm
  • Understand all components of the Galaxy job running stack
  • Understand how the job_conf.xml file controls Galaxy's jobs subsystem
  • Have a strong understanding of Galaxy job destinations
  • Know how to map tools to job destinations
  • Be able to use the dynamic job runner to make arbitrary destination mappings
  • Understand the job resource selector config and dynamic rule creation

Galaxy Server administration - Connecting Galaxy to a compute cluster https://tess.elixir-europe.org/materials/galaxy-server-administration-connecting-galaxy-to-a-compute-cluster Resources related to configuration and maintenance of Galaxy servers Questions of the tutorial: - How to connect Galaxy to a compute cluster? - How can I configure job dependent resources, like cores, memory for my DRM? Objectives of the tutorial: - Be familiar with the basics of installing, configuring, and using Slurm - Understand all components of the Galaxy job running stack - Understand how the `job_conf.xml` file controls Galaxy's jobs subsystem - Have a strong understanding of Galaxy job destinations - Know how to map tools to job destinations - Be able to use the dynamic job runner to make arbitrary destination mappings - Understand the job resource selector config and dynamic rule creation
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