Training materials
Related resources: ARROWSMITH or Assembly dataset or Public Health Alliance for Genomic Epidemiology or Ready For BioData Management? or Sequence analysis slides or Variant Analysis dataset
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Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Formatting Plant Phenotyping Data-format data sharing -
Tutorial
Assembly - Making sense of a newly assembled genome
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Tutorial
Variant Analysis - Mapping and molecular identification of phenotype-causing mutations
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Tutorial
Variant Analysis - Microbial Variant Calling
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Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
Tutorial
Variant Analysis - Calling variants in non-diploid systems
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Tutorial
Assembly - Unicycler Assembly
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Tutorial
Variant Analysis - Exome sequencing data analysis
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Tutorial
Assembly - De Bruijn Graph Assembly
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