Training materials
Licence: Creative Commons Attribution 4.0 International
and Scientific topics: Data integration and warehousing or Metabolomics or Metatranscriptomics or Structure prediction or Toxicology or Workflows
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Presentation
FAIRtracks and Omnipy – FAIRtracks interoperability story
•• intermediateData submission, annotation, and curation Data identity and mapping Data quality management Data governance Workflows Data handling -
Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
hands-on tutorial
AlphaFold and friends on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction AlphaFold Database (13181) -
Video
ELIXIR-CONVERGE - The why of research data management
• beginnerData management FAIR data Data submission, annotation, and curation Data security Data integration and warehousing Data Life Cycle Data Steward Data Data access management Data management plan Data managment plan Data handling ELIXIR-CONVERGE -
course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
hands-on tutorial
Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)
•• intermediateMetabolomics -
WEBINAR: bio.tools - making it easier to find, understand and cite biological tools and software
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hands-on tutorial
Mass spectrometry: LC-MS preprocessing with XCMS
•• intermediateMetabolomics -
hands-on tutorial
Mass spectrometry imaging: Finding differential analytes
•• intermediateMetabolomics -
hands-on tutorial
Mass spectrometry : GC-MS analysis with metaMS package
• beginnerMetabolomics
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