Training materials
Scientific topics: Computational biology or Image analysis or Protein modifications or Sequence assembly or Simulation experiment
and Keywords: Computational modelling or Kinetic modeling or parallel computing
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Tutorial, Presentation
Materials from 'Introduction to High Performance Computing for Life Scientists' course
•• intermediateComputational biology HPC GPU parallel computing -
Video
Parameter Scanning and Sampling in COPASI
• beginnerSimulation experiment Modelling and simulation Analysis Visualisation SystemsBiology ComputationalBiology Computational modelling Kinetic modeling COPASI -
Video
Metabolic Control Analysis in COPASI
• beginnerSimulation experiment Systems biology Modelling and simulation Analysis Visualisation SystemsBiology ComputationalBiology Computational modelling Kinetic modeling COPASI -
Video
Time Course Simulation in COPASI
• beginnerSimulation experiment Modelling and simulation Visualisation SystemsBiology ComputationalBiology Computational modelling Kinetic modeling COPASI -
Video
Model Creation using COPASI
• beginnerSimulation experiment Modelling and simulation Visualisation SystemsBiology ComputationalBiology Computational modelling modeling Biomodelling Model Kinetic modeling COPASI -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling Model Kinetic modeling SED-ML COMBINE