Training materials
Operations: Analysis or Data retrieval or Visualisation
and Keywords: Computational modelling or DES or FAIR data or object-oriented programming
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Video
Parameter Scanning and Sampling in COPASI
• beginnerSimulation experiment Modelling and simulation Analysis Visualisation SystemsBiology ComputationalBiology Computational modelling Kinetic modeling COPASI -
Video
Metabolic Control Analysis in COPASI
• beginnerSimulation experiment Systems biology Modelling and simulation Analysis Visualisation SystemsBiology ComputationalBiology Computational modelling Kinetic modeling COPASI -
Video
Time Course Simulation in COPASI
• beginnerSimulation experiment Modelling and simulation Visualisation SystemsBiology ComputationalBiology Computational modelling Kinetic modeling COPASI -
Video
Model Creation using COPASI
• beginnerSimulation experiment Modelling and simulation Visualisation SystemsBiology ComputationalBiology Computational modelling modeling Biomodelling Model Kinetic modeling COPASI -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 1, Institute requirements
• beginnerFAIR data Data management Data handling Analysis Data preserving Data reuse Data management planning Data sharing -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 1, Publisher requirements
• beginnerFAIR data Data management Data handling Analysis Data management planning Data preserving Data sharing -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 1, Funder requirements
• beginnerFAIR data Data management Data handling Analysis Data management planning -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 1, Introduction Landscape Wrap up
• beginnerData management FAIR data Analysis Data handling Data management planning -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling Model Kinetic modeling SED-ML COMBINE