Training materials
Keywords: ChIP-Seq or Communication or Exploratory-analysis or FEGA or Institute of Biological, Environmental and Rura... or metagenomics
and Resource type: Video or hands-on tutorial
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Video
Introduction to Federated EGA, a resource for discovery and access of human data across national borders
• beginnerFEGA Federated EGA ELIXIR Converge -
Tutorial, Video, Series of videos
Federated EGA: Introductory videos
• beginnerFederated EGA FEGA metadata ELIXIR-CONVERGE Phenotype SARS-CoV-2 -
hands-on tutorial
Hands-on for 'Taxonomic Profiling and Visualization of Metagenomic Data' tutorial
• beginnerMetagenomics metagenomics taxonomic profiling -
hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• beginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa -
Video
EGA Submitter Portal Tutorial
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hands-on tutorial
Hands-on for 'Assembly of metagenomic sequencing data' tutorial
• beginnerMetagenomics metagenomics assembly -
Video, Presentation
The essentials of DUO codes
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Video, Presentation
Introduction to the EGA and its Ecosystem of Tools
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hands-on tutorial
Hands-on for 'Identification of the micro-organisms in a beer using Nanopore sequencing' tutorial
• beginnerMetagenomics metagenomics nanopore beer citizen science -
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop
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