Training materials
Keywords: Biomodelling or Data management planning or Populus-tremula or Python
and Target audience: Computational biologists or PhD candidate or PhD candidates or beginner bioinformaticians
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Training materials, slides / presentation, slide deck / presentation, Presentation
Life Science RDM 2023 Course
• beginnerData management FAIR data Biology Genomics Imaging Proteomics Bioinformatics Biodiversity Data Management Plan Data management planning Data Steward Data Stewardship Wizard Data Life Cycle Research Data Management Research Infrastructure -
Video
Model Creation using COPASI
• beginnerSimulation experiment Modelling and simulation Visualisation SystemsBiology ComputationalBiology Computational modelling modeling Biomodelling Model Kinetic modeling COPASI -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 1, (Reviewing) Data Management Plans
• beginnerData management FAIR data Data handling Data management planning -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 2, Data security and privacy
• beginnerFAIR data Data management Data handling Data security Data privacy Data management planning -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 3, Introduction Wrap up
• beginnerFAIR data Data management Data handling Data management planning -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 1, Institute requirements
• beginnerFAIR data Data management Data handling Analysis Data preserving Data reuse Data management planning Data sharing -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 1, Introduction Landscape Wrap up
• beginnerData management FAIR data Analysis Data handling Data management planning -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling Model Kinetic modeling SED-ML COMBINE -
Jupyter notebooks
Gentle hands-on introduction to Python programming
• beginnerSoftware engineering Python programming
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