Training materials
Keywords: Babraham Institute or Clinical data or FAIR principles or HPC or Roslin Institute or transcriptomics
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Tutorial, Presentation
Materials from 'Introduction to High Performance Computing for Life Scientists' course
•• intermediateComputational biology HPC GPU parallel computing -
Using ASAP for Single-Cell Analysis
• beginnergenes and genomes biomarkers experimental biology functional genomics next generation sequencing population genomics single-cell biology training transcriptomics bart deplancke group -
Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
lessons
Data Interoperability
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lessons
Standard Vocabularies
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lessons
FAIR, Open Data and Open Science: an introduction
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WEBINAR: Pro tips for scaling bioinformatics workflows to HPC
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Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
Introduction to bulk RNA-Seq: From Quality Control to Pathway Analysis
• beginnerfunctional genomics genes and genomes next generation sequencing transcriptomics training