Training materials
Keywords: Variant-calling or Regex or Singularity
and Target audience: Intermediate or Post Docs or bioinformaticians or medical students
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Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
Summing Up
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More tools
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Operators
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One last Wrinkle
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More Patterns
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Simple Patterns
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Introduction to Regular Expressions
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Under the Hood