Training materials
Difficulty level: Intermediate
and Keywords: Communication or Modeling or Populus-tremula or Version control or covid19 or data management plan
-
Learning pathway
Version control with Git
•• intermediateSoftware engineering Open science Version control -
hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediatevariant-analysis covid19 virology one-health -
hands-on tutorial
Hands-on for 'Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads' tutorial
•• intermediateassembly covid19 -
hands-on tutorial
Hands-on for 'Removal of human reads from SARS-CoV-2 sequencing data' tutorial
•• intermediatesequence-analysis covid19 -
hands-on tutorial
Hands-on for 'Submitting sequence data to ENA' tutorial
•• intermediategalaxy-interface covid19 -
hands-on tutorial
Hands-on for 'Virtual screening of the SARS-CoV-2 main protease with rxDock and pose scoring' tutorial
•• intermediatecomputational-chemistry covid19 one-health -
Video, Slides, Webinar
DSW Template Development Kit: The Tutorial
•• intermediateData management data stewardship data management plan FAIR data management software tools DMP templates template development -
PDF, slide deck / presentation
Elaboración de un Plan de Gestión de Datos (DMP): teoria y práctica
•• intermediateFAIR data Data management ELIXIR-CONVERGE DMP data management plan research data management FAIR principles DMP tools DMP templates tools template competency DMP evaluation evaluation on-line Spanish e-learning -
Tutorial, Documentation
BioSimulators tutorial and help
•• intermediateSystems biology Computational biology Simulation experiment Modelling and simulation Modeling biomodel dynamic simulations COMBINE OMEX SED-ML SBML BNGL -
Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling Model Kinetic modeling SED-ML COMBINE