Training materials
Difficulty level: Intermediate
and Keywords: Babraham Institute or Chip-seq or Exploratory-analysis or Python or metagenomics or variant-analysis or workflows
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e-learning
Explore and Visualize Your Data with Python
•• intermediateData visualisation Bioinformatics Python Data analysis -
Byte-sized RSE Session 3: Testing your Python code
•• intermediateRSE Research software Python coding skills testing -
hands-on tutorial
Hands-on for 'Avian influenza viral strain analysis from gene segment sequencing data' tutorial
•• intermediatevariant-analysis virology -
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediatevariant-analysis covid19 virology one-health -
hands-on tutorial
Hands-on for 'M. tuberculosis Variant Analysis' tutorial
•• intermediatevariant-analysis prokaryote one-health -
hands-on tutorial
Hands-on for 'SQL with Python' tutorial
•• intermediatedata-science SQL Python jupyter-notebook -
hands-on tutorial
Hands-on for 'Workflow Reports' tutorial
•• intermediategalaxy-interface workflows -
hands-on tutorial
Hands-on for 'Creating, Editing and Importing Galaxy Workflows' tutorial
•• intermediategalaxy-interface workflows -
hands-on tutorial
Hands-on for 'Using Workflow Parameters' tutorial
•• intermediategalaxy-interface workflows
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