TeSS (Training eSupport System)

Training materials

Difficulty level: Intermediate

and Keywords: Data preserving or AAI or Biomedical Literature or Knowledge graph or Phylogenetics or one-health

14 materials found

Online material, online course

Workshop on Resources for Plant Sciences, 2023

•• intermediate
Plant biology service bundle eLearning EeLP plant science Data Visualization Gene Ontology Knowledge graph MIAPPE
hands-on tutorial

Avian influenza viral strain analysis from gene segment sequencing data

•• intermediate
Genetic variation Variant Analysis one-health virology
hands-on tutorial

Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data

•• intermediate
Genetic variation Variant Analysis covid19 one-health virology
hands-on tutorial

M. tuberculosis Variant Analysis

•• intermediate
Genetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote tuberculosis
hands-on tutorial

Identifying tuberculosis transmission links: from SNPs to transmission clusters

•• intermediate
Evolutionary biology Genomics Microbiology Infectious disease DNA polymorphism Evolution microgalaxy one-health prokaryote
hands-on tutorial

Virtual screening of the SARS-CoV-2 main protease with rxDock and pose scoring

•• intermediate
Computational chemistry covid19 one-health
Video, Training materials, E-learning

Validate Graph Data with SHACL

•• intermediate
Medical informatics FAIR data Data management Computer science Validation Data handling Clinical data SHACL Data validation RDF Knowledge graph GraphDB RDF graph validation
Video, Training materials, Mock data, E-learning

How to use Python and R with RDF Data

•• intermediate
Computer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Python R GraphDB
Documentation, Presentation

ELIXIR AAI Engagement Meetings Materials

•• intermediate
Computer science AAI IAM Authentication authorisation
Webinar, Presentation, Documentation

Integrating to ELIXIR AAI -- instructions for developers

•• intermediate
Computer science AAI IAM Authentication authorisation

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Training materials

Workshop on Resources for Plant Sciences, 2023

Avian influenza viral strain analysis from gene segment sequencing data

Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data

M. tuberculosis Variant Analysis

Identifying tuberculosis transmission links: from SNPs to transmission clusters

Virtual screening of the SARS-CoV-2 main protease with rxDock and pose scoring

Validate Graph Data with SHACL

How to use Python and R with RDF Data

ELIXIR AAI Engagement Meetings Materials

Integrating to ELIXIR AAI -- instructions for developers