Training materials
Difficulty level: Beginner
and Scientific topics: Computer science or Data integration and warehousing or Function analysis or Metabolomics
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Bioinformatics, Computational Biology, Computer Science, Programming, Coding, Education
R for Beginners
• beginnerBioinformatics Computational biology Computer science Coding Programming -
Video
ELIXIR-CONVERGE - The why of research data management
• beginnerData management FAIR data Data submission, annotation, and curation Data security Data integration and warehousing Data Life Cycle Data Steward Data Data access management Data management plan Data managment plan Data handling ELIXIR-CONVERGE -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
Video, E-learning
FAIR principles in practice for health data
• beginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework FAIR Findability Accessibility Interoperability Reusability -
hands-on tutorial
Hands-on for 'Mass spectrometry : GC-MS analysis with metaMS package' tutorial
• beginnerMetabolomics metabolomics -
hands-on tutorial
Hands-on for 'Mass spectrometry: LC-MS data processing' tutorial
• beginnerMetabolomics metabolomics -
hands-on tutorial
Hands-on for 'Mass spectrometry imaging: Examining the spatial distribution of analytes' tutorial
• beginnerMetabolomics metabolomics -
Video, Training materials, E-learning
Training Primer (RDF and SPARQL)
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Triplestore Ontology -
Video, Training materials, E-learning
Semantic Standards
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Data handling Standardisation and normalisation Clinical data Data semantics FAIR Standards Ontology SNOMED CT LOINC ATC CHOP ICD Interoperability