Training materials
Difficulty level: Beginner
and Keywords: DMP or ELIXIR-CONVERGE or Modeling or Reproducibility or medicine and health or metagenomics
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Introduction to Viral Bioinformatics
• beginnergenes and genomes infectious disease medicine and health services and resources training -
Video
ELIXIR-CONVERGE - The why of research data management
• beginnerData management FAIR data Data submission, annotation, and curation Data security Data integration and warehousing Data Life Cycle Data Steward Data Data access management Data management plan Data managment plan Data handling ELIXIR-CONVERGE -
Tutorial, Video, Series of videos
Federated EGA: Introductory videos
• beginnerFederated EGA FEGA metadata ELIXIR-CONVERGE Phenotype SARS-CoV-2 -
hands-on tutorial
Hands-on for 'Taxonomic Profiling and Visualization of Metagenomic Data' tutorial
• beginnerMetagenomics metagenomics taxonomic profiling -
e-learning
Cellosaurus : A resource on cell lines
• beginnerBiosciences Experimental design and studies basic research Reproducibility cell line -
NGS - Quality Control, Alignment, Visualisation
• beginnertraining genes and genomes next generation sequencing environmental science medicine and health -
Long-read Sequence Analysis
• beginnertraining genes and genomes next generation sequencing environmental science medicine and health rémy bruggmann group -
Discover ViralZone
• beginnergenes and genomes infectious disease medicine and health services and resources training alan bridge group -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• beginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa