Training materials
Difficulty level: Beginner
and Keywords: Data management planning or Data sharing or Gene Expression or Proteins or Python or Shell or data management plan
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hands-on tutorial
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Gentle Introduction to Python
• beginnerPython script Software engineering Programming Python -
E-Learning, Training materials
Biology meets Programming - Introduction to Bioinformatics using Python
• beginnerBioinformatics Biology Python Python biologists Programming Data Analysis Sequence Analysis -
course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
Video
Overview of the FAIRsharing.org
• beginnerFAIR data Data management FAIR FAIR principles Data sharing -
youtube video, video
Data Management Planning tips
• beginnerData management FAIR data ELIXIR-CONVERGE DMP data management plan research data management FAIR principles DMP tools DMP templates tool template DMP evaluation RDMkit Data Stewardship Wizard DSW Spanish español -
youtube video, video
ELIXIR resources and Data Management Plans tools: RDMkit and Data Stewardship Wizard
• beginnerData management FAIR data ELIXIR-CONVERGE ELIXIR DMP data management plan research data management FAIR principles DMP tools DMP templates tool template DMP evaluation RDMkit Data Stewardship Wizard DSW -
course materials, online course, Training materials
Cloud-SPAN Prenomics
• beginnerBioinformatics Software engineering Genomics Query and retrieval Data handling Cloud computing Shell Command line Amazon Web Services genomics HPC Data analysis bioinformatics -
hands-on tutorial
Inferring single cell trajectories with Scanpy (Python)
• beginnerTranscriptomics 10x Python Single Cell jupyter-notebook paper-replication -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 6, Metadata
• beginnerFAIR data Data management Data handling FAIR Data management planning Metadata