Training materials
Contributors: Prof. Tom Freeman or Emily Angiolini or Dr. Paul Shaw or Anatole Chessel or Jordi Rambla or Beatriz Serrano-Solano
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hands-on tutorial
Hands-on for 'Whole transcriptome analysis of Arabidopsis thaliana' tutorial
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hands-on tutorial
Hands-on for 'Analysis of plant scRNA-Seq Data with Scanpy' tutorial
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hands-on tutorial
Hands-on for 'Object tracking using CellProfiler' tutorial
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hands-on tutorial
Hands-on for 'Nucleoli segmentation and feature extraction using CellProfiler' tutorial
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slides
Slides for 'Nucleoli Segmentation <br> & <br> Feature Extraction <br> using CellProfiler' tutorial
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Video, Manual, Slides, Installation instructions
How to install and deploy Beacon
• beginnerGenomics genomics open access eLearning EeLP -
Jupyter notebook, PDF
Introductory image processing on biological images using python.
• beginner -
Train the trainer
• beginnerComputational biology Bioinformatics training pedagogy -
Poster
Evaluation of Helium: Visualisation of Large Scale Plant Pedigrees
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Video
BiVi theme: Pathways