Training materials
Keywords: ChIP-Seq or Containerization or Matlab or Transcriptomics or ansible
and Contributors: Helena Rasche or PerMedCoE or SAiGENCI
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hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
PerMedCoE/mpi-in-container
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stemangiola/bioc_2020_tidytranscriptomics
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hands-on tutorial
Monitoring Galaxy and Pulsar with Sentry
• beginnerGalaxy Server administration ansible git-gat -
hands-on tutorial
Use Apptainer containers for running Galaxy jobs
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
Setting up Celery Workers for Galaxy
• beginnerGalaxy Server administration ansible git-gat -
hands-on tutorial
Reference-based RNA-Seq data analysis
• beginnerTranscriptomics QC bulk collections cyoa drosophila rna-seq -
hands-on tutorial
Distributed Object Storage
• beginnerGalaxy Server administration ansible storage -
hands-on tutorial
Hands-on for 'Use Singularity containers for running Galaxy jobs' tutorial
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