Training materials
Contributors: Hana Pergl Sustkova or Martin Hubalek or Mattias Strömberg or Michael Krone or Mr. William Edward Hill or Nate Coraor or Pavankumar Videm or PhD BSc FSB or Prof. Tom Freeman or Stéphanie Robin or cambiotraining
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x Single Cell paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
cambiotraining/corestats
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cambiotraining/python-data-science
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cambiotraining/hpc-intro
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cambiotraining/sars-cov-2-genomics
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cambiotraining/intro-machine-learning
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lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README