Training materials
Target audience: Life Scientists or Postgraduate students or Students or postgrad or software engineers
and Contributors: Florian Heyl or Mateo Boudet or Matthias Bernt
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hands-on tutorial
Building an amplicon sequence variant (ASV) table from 16S data using DADA2
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis 16S Microbiome metabarcoding microgalaxy -
hands-on tutorial
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
ATAC-Seq data analysis
• beginnerEpigenomics Epigenetics -
hands-on tutorial
RNA-Seq analysis with AskOmics Interactive Tool
• beginnerTranscriptomics -
hands-on tutorial
CLIP-Seq data analysis from pre-processing to motif detection
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'Use Singularity containers for running Galaxy jobs' tutorial
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slides
Refining Genome Annotations with Apollo
• beginnerGenome Annotation prokaryote -
slides
Introduction to ATAC-Seq data analysis
• beginnerEpigenomics Epigenetics -
slides
Integrate and query local datasets and distant RDF data with AskOmics using Semantic Web technologies
• beginnerTranscriptomics